Pontibacillus sp. HMF3514: GS400_18670
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Entry
GS400_18670 CDS
T06374
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pof
Pontibacillus sp. HMF3514
Pathway
pof03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GS400_18670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pof03400
]
GS400_18670
DNA repair and recombination proteins [BR:
pof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GS400_18670
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
DZR
Motif
Other DBs
NCBI-ProteinID:
QHE53920
UniProt:
A0A6P1HL71
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All DBs
Position
complement(3695970..3696836)
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AA seq
288 aa
AA seq
DB search
MHTMWKGTISFGLVNIPVKLHSATENKDIKLRQLHKECKTPIKYERTCPNCDEEVKNEEI
VKAYEYAESKFVVLDDEDLENLKKEQEDKAVEIVDFVKLEEIDPIYFEKSYFISPNEGGS
KAYSLLRKALKDTGKIGIAKIIIRSKEQLAIVRIYENTLIMETIHYPDEVRDYQEVPNVP
EEEELGKKELDTAKNLIEQLTTEFEPENYKDEYRTALMELIEAKKNDEEITTAKPQPTPD
NVTDLMEALEKSLEKTKGNKGASKKKTQKKKATQKKTEDKEDTKKKTS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgcatacgatgtggaaaggcacaatcagttttggactcgttaatattcctgttaagcta
cattctgctacagaaaataaagacatcaagctacgtcagcttcataaggaatgtaaaacc
ccaatcaaatatgagcgtacatgcccgaattgcgatgaagaggtcaaaaatgaagaaatc
gtaaaagcttatgaatatgctgaaagtaaatttgttgtattagatgatgaggatcttgag
aatttgaaaaaagaacaagaggataaagcggttgagattgtagattttgttaagcttgag
gaaattgatccgatttattttgaaaaaagctacttcatctcaccgaatgaaggaggatct
aaggcctattcattacttcgtaaagcattaaaagatacagggaagatcggtattgcaaaa
atcattattcgatccaaagaacaactcgccattgtacgtatttatgaaaatacacttatt
atggagactattcattacccagacgaagtccgagactatcaggaggttcctaatgttcct
gaggaagaggaactcggtaagaaagaacttgatacagccaaaaacttaatcgagcagctt
acgacagagtttgaacctgagaactataaagatgaatatcgaacggcacttatggagctc
atagaggcgaagaaaaacgatgaagaaataacaactgctaagcctcaaccaacaccagat
aatgttacggacttaatggaagctctagaaaaatcgcttgagaagacaaaagggaataaa
ggagcaagcaaaaagaagactcagaaaaagaaggctacacaaaagaaaaccgaagacaag
gaagataccaagaagaagacatcctaa
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