Pyrobaculum oguniense: Pogu_0146
Help
Entry
Pogu_0146 CDS
T01735
Name
(GenBank) Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
pog
Pyrobaculum oguniense
Pathway
pog03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pog00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Pogu_0146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pog03021
]
Pogu_0146
Transcription machinery [BR:
pog03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Pogu_0146
Prokaryotic type
Archaeal type
TFB
Pogu_0146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
Desulfoferrod_N
Ribosomal_S27e
Zn_ribbon_LysW
Zn_Ribbon_Prim
ORC6_2nd
FtrD-like
Zn_Tnp_IS91
Lar_restr_allev
zf-C2H2_FBX41
A2L_zn_ribbon
ORC6
Motif
Other DBs
NCBI-ProteinID:
AFA38173
UniProt:
H6Q670
LinkDB
All DBs
Position
complement(127765..128811)
Genome browser
AA seq
348 aa
AA seq
DB search
MNEKFLYPRKAYKLAMSSTGPSSSGKPLKLRINRDSEGYLSLVTESGEIYRCPICGNDRF
VYNYERGEVVCIVCGAVVQEQLLDLGPEWRAFTSEEKGQRARTGAPLTRLISEALTTVID
WRDKDVSGKELDIKRKLEVIRLRKWQTRARVQTSYERNFIQAAQELERLKSSMGVPRPCV
EQALEIYRQALEKELVRGRSVEAMAAAALYMACRMMRMPRPLDELVRYTKASRREVARCY
RLLLRELNVKVPISDPVLYISRIAEQLKLSGEVVKAAIDILQRAKKAGITAGKDPAGLAA
AAVYIASLMHGDNRTQKDFAVAAGVTEVTVRNRYKELAKALNIKVPVK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaagtttttataccctagaaaagcttataaactcgctatgtcaagcacaggc
ccatcttcttccggcaagcccctaaagctccgcataaatcgagatagtgaggggtattta
agtcttgttaccgagtcgggtgagatctaccgctgtcccatatgcggcaatgacagattt
gtctacaactacgagaggggtgaagttgtctgtatagtgtgcggtgcagttgtgcaggaa
cagctacttgacctcggcccagagtggagggctttcacatcagaggagaagggccagagg
gcgcgcactggcgcgccgcttactaggctcatctctgaggcgttgaccacagttatcgat
tggcgagacaaggacgtctccggtaaggagctggacataaagaggaagttggaggtaata
aggctgaggaagtggcagaccagggcccgtgtgcagacctcatacgagaggaactttata
caagcggcgcaggagctggagaggctgaagagctccatgggcgtgccaaggccgtgcgtc
gagcaagccctcgagatatacaggcaggcacttgaaaaagagctggtgaggggcagatct
gtcgaggcgatggccgcggcggcgctatacatggcgtgccgcatgatgaggatgccgaga
ccactggacgagctcgtgaggtacacaaaggcatctagaagagaagtggcgaggtgttac
aggctgttgctaagagagctgaacgtaaaggtacctataagcgaccctgtactctacatt
tccagaatagcggagcaactgaagctcagcggcgaagttgtaaaggcggcgattgacatt
ctgcagagggctaaaaaggccggcatcacggcggggaaggacccagctggtttagccgct
gccgcggtttatatagcctcgctgatgcatggcgataacaggactcagaaagacttcgct
gtggcggccggcgtgacggaggttactgtgagaaataggtacaaggagctggcaaaggcg
cttaatataaaggtccctgtaaagtaa
DBGET
integrated database retrieval system
