Pyrobaculum oguniense: Pogu_0319
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Entry
Pogu_0319 CDS
T01735
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pog
Pyrobaculum oguniense
Brite
KEGG Orthology (KO) [BR:
pog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pog03400
]
Pogu_0319
DNA repair and recombination proteins [BR:
pog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pogu_0319
Archaeal homologous recombinant proteins
Pogu_0319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_27
AAA_29
GAS
DUF1664
Rtf2
Cauli_AT
RUBY_RBDX
Zn_ribbon_3
BORCS6
Motif
Other DBs
NCBI-ProteinID:
AFA38346
UniProt:
H6Q6W6
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All DBs
Position
270894..273278
Genome browser
AA seq
794 aa
AA seq
DB search
MWRIERIELENFRSYKGRHVVSLGDVNILWGRIGAGKTSLLYAVEYALYGRQLEVKERVA
KLLDLINVEAHEMRVSLVLSDGGRLLEIERRLGRRGDEKIVVRINGEELRGREAERRLEE
LLGADEDIYERLIYISHRTLEGFIYGTSQKRSLTVDRLFGIDVIDSVVRVVSSVEKSLLA
KAEELRGRLAAYEKYKEVIRRYGGFAGVKKRLEDLTKEVETLEEREAALSRDAEDLARKR
AEHLAKLREHESMLLEYYKTRSELEVLESATEGGTYDLSTVEKLRDALREAVEEFEHVVG
EELAEKLSKAGDVESLSIAMMDAYNALSRLQNELEAQIAEAKKLYEQYSARVRKIDEEIA
EARDRLRRLEKYYARFKELQKTIQSVDSARASLAELRRQIQTLEREVSYSSALRVVALYA
AETGAEKCPICGAPVRKEDLLRRVEEVEARHGTLIKEVEELKERASQLEKAVEEAEALSG
EVAEYLAVKTRLEELETEREEAAKKALQAEKSLKQLEKKTERLRLLLARVDRRTISDTLA
KYGRAVRIRELRKRLREIEDSLKRIGITSDVISIDVNWREVVEELEKTSRRLAEAYRERA
LLEEVVREVGENAEALKKKLDNALYAYGKLQEVKAKLELAKINARARLLEVARSRFNEVF
TSLYRYGDIVRVDADLEQRRGFYDFHAITPSGDRYGISKLSDGQRLSIALALALALRDIA
RINLGFVIFDEPIPYVDVNIRRAFAEVVKALASRFQIVVATQSREFAEMIKEAVPNALLF
KVDKKESSEAVVES
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggatagagaggattgagctggaaaacttccgctcctacaaggggagacatgtt
gtgagcctaggcgatgtgaacatactgtgggggagaataggggcgggtaagacatctctc
ctatacgcagtagagtacgccctctacgggaggcaattggaggtcaaggaaagagtcgcc
aagttgctagacctaatcaacgtcgaagctcacgagatgcgagtctccctcgtcctaagc
gatggtgggagattactcgagatagaaaggcgactagggaggcgcggcgacgaaaagata
gtggtgagaatcaacggggaagagctccgggggagagaggcggaaaggaggctggaggag
ctgttaggcgccgacgaagatatctacgaaagactcatctacatatcgcataggacccta
gagggctttatctacgggacttcgcagaagaggtcgctaacagtagataggctcttcggt
atcgatgtgatagatagcgttgtccgggttgtttcgtccgttgagaagtcccttttggcc
aaggccgaggagctgagggggaggcttgcggcgtatgagaagtataaggaggtgatcaga
agatacggcggtttcgccggcgtcaagaagcgcctagaagacttaacaaaagaggtagaa
accctggaggagagggaagcggcgctgtctagagacgcagaggacttagcaagaaaaaga
gcggagcacttagccaagctgagggagcacgagtctatgctccttgagtactacaagacg
aggtcggagctagaggttttagaaagcgccacagagggaggaacttatgacttgtcgaca
gtggaaaagctgagagatgcgctcagagaagccgtagaggaatttgaacatgtcgttggc
gaggagcttgccgagaagctctcaaaagcgggcgatgtggagtcgctgtctattgccatg
atggatgcgtacaacgccctgtccaggttgcaaaacgaactagaagcgcagattgcagaa
gcgaaaaaactctacgaacagtactcggcaagagttaggaaaatcgatgaggagatagcc
gaggcacgggataggctgagaagacttgaaaagtactacgcccgtttcaaggagttgcag
aagactatccagtcagtggattcggctcgcgcctcgctggcggagcttagaagacagatt
cagacgttggaaagagaggtttcttactcctccgcgttgagagtagtggcgctctacgcc
gcggagaccggggcagaaaagtgccccatatgcggcgctcctgtgcggaaagaggatctc
cttcgccgtgtggaggaggtggaggctagacacggaactctcatcaaggaggtggaggag
ctgaaggagagggcttctcagctggaaaaagccgtggaagaggcagaggcgctaagcggc
gaggtcgcggagtatctagccgtgaagactagattagaggagcttgaaaccgagagggaa
gaggcggcaaagaaggcgttgcaagcagagaaatccttgaaacagcttgaaaagaagaca
gaaaggctacgcttgttgctggctagagttgatagaagaactatatctgataccctcgcc
aagtatggaagggctgtaaggattagagagttacgtaagcgtttgagagaaatcgaggac
tcgttgaaaaggattgggatcacgagcgatgtcataagcattgatgtgaactggagagag
gtcgtagaggagcttgaaaaaacctcgcgcagactcgccgaggcgtatagagagagagcc
ctcctagaagaagttgtgagagaagtcggcgaaaatgccgaggcgttgaaaaagaaactg
gacaacgccctgtacgcctatggcaaattgcaggaggttaaggctaagctggagcttgcc
aagatcaacgcgagggcgcggctccttgaagtggccaggagcagattcaacgaggtattc
acctctctgtacagatatggcgacatcgtaagggttgatgccgacttagaacagcgcagg
ggcttctacgacttccacgccataactcccagcggggatagatatggaatctctaagctc
agcgacggccagcggctctccatagcccttgccctcgcgctggcgctccgggatattgca
agaataaacttgggatttgtaatcttcgacgagccgatcccctacgtggatgtgaacata
agaagagcctttgccgaagtggtcaaggcgctggcgagccgtttccagatagttgtcgct
acccagtcgagggaattcgcggagatgataaaagaagcggtccccaacgcgcttctcttc
aaggtggataaaaaagagagctccgaggcagtagtggagtcctag
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