Pyrobaculum oguniense: Pogu_0391
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Entry
Pogu_0391 CDS
T01735
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pog
Pyrobaculum oguniense
Brite
KEGG Orthology (KO) [BR:
pog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pog03016
]
Pogu_0391
Enzymes [BR:
pog01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Pogu_0391
Transfer RNA biogenesis [BR:
pog03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Pogu_0391
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AFA38418
UniProt:
H6Q720
LinkDB
All DBs
Position
329218..329781
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AA seq
187 aa
AA seq
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MNLVRSFIAVDLDAPDVVKRIEEVQREVVRLGLDIKLVERENLHITLRFLGEIPQQRVND
VIRALSTVKFAKFEMRLADLGVFPDLSRPRVLWVGVSQGAEALANLANAVRAAVDKYAEH
EEEREFTPHLTIGRIKSSRNVDRLGDLIRRYKGVEFGVVVVDKVKLKRSVLTPRGPIYSD
LFVVPLT
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgtcagatcttttatcgcagtagacctcgacgccccagacgtcgtgaagaga
atcgaggaggttcaacgcgaggtggtgagactcggcttagacataaagctcgtggagagg
gaaaacctgcacataactctccgcttccttggggaaatccctcagcagagggttaacgat
gtgatacgcgcgttgtccacggttaagttcgccaagtttgagatgaggctcgcagacctc
ggcgtcttccccgatttgtcgaggccgcgggttttgtgggtaggcgtatcccaaggcgcg
gaggcgctggccaacttagcaaatgcggtgagggcggctgtggataagtatgcagaacac
gaggaggagagagaattcacgccgcatttgaccatcggccggattaagagtagtagaaat
gtagaccggctcggggatttgatacgccgctacaagggagtagagttcggcgtagtagtc
gttgacaaggtgaagttaaaaaggtcggtgcttacgccgaggggacctatttatagcgac
ctatttgttgttccacttacgtga
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