Pyrobaculum oguniense: Pogu_0454
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Entry
Pogu_0454 CDS
T01735
Name
(GenBank) tRNA pseudouridine synthase, TruD family
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pog
Pyrobaculum oguniense
Brite
KEGG Orthology (KO) [BR:
pog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pog03016
]
Pogu_0454
Enzymes [BR:
pog01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Pogu_0454
Transfer RNA biogenesis [BR:
pog03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pogu_0454
Prokaryotic type
Pogu_0454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AFA38481
UniProt:
H6Q7Q1
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All DBs
Position
378890..380131
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AA seq
413 aa
AA seq
DB search
MREAPPFDKALGMYYYVTDTCPSGGVIKKSPEDFVVEEVLADGTVVAVGGVQLRPRVGGW
TWIHVVKRNVDTIRLMLRLAKALGVSPREVSVGGIKDTRAVASHIISVRGAVKGLPEVPG
VKFLGMWSMDRPMSPSEIYGNRFTIVLRDVERVDCAVEALEALKSAAVPNYYGYQRFGTI
RPVSHLLGRALLRKSPEEFFDAMFCKIFEHESAAAKKARELACRGEYQKALETFPRRFVE
ERAFLRRLAQGYDMWNAIMGIPLQILRIYVEAAQSYLFNRFLSARLELGPLDKPLEGDLV
EVGGQVAYYAEGLGGDVVLPVAGAGVRMPRGKVGEALLKVMKGEGVDPAAFLKMPRGLKA
YGSYRRARLEVGDFSYAVRGRDVELRFVLPRGSYATVLLREAVKPAEPYRHGF
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggaggctccgccgtttgacaaggcgcttggcatgtactactatgtgactgacacg
tgcccctcggggggcgtgattaagaagagcccagaggacttcgtcgtggaggaggtgttg
gcggatgggacggtggtggccgtcggcggcgttcagctgaggccgagggtcgggggctgg
acgtggatccacgtggtgaagcgcaatgtcgacacgattaggctgatgttacgcctcgcc
aaggccctcggcgtaagtcccagggaagtgtctgtgggaggtatcaaggatacccgggct
gtggcctcccacataatctcggttaggggggccgtgaaaggtttgccggaggtccccggc
gtcaagttcctcggcatgtggtcaatggataggcctatgtcgccgtctgagatatacggc
aaccgcttcaccattgtgttacgcgacgtggagagggtggactgcgccgtggaggctctg
gaggccttgaagagcgcggcggtgcccaactactacggctaccagcgcttcggcactatt
aggcctgtgtcgcacctcttgggcagggcgcttttgcggaaaagccccgaggagtttttc
gacgcgatgttctgcaagatcttcgaacacgaatcggccgccgcgaagaaggccagggag
ctggcgtgtaggggggagtaccagaaggccctagagaccttccccaggcgatttgtcgag
gagagggccttcctccgcaggctggctcagggctatgacatgtggaacgccattatgggg
atacccctccagatcttgcggatatacgtcgaggcggcccagtcctacctcttcaacaga
ttcttatccgcccggctggagctaggccccctggacaagcctctagaaggcgacctcgtg
gaggtgggtgggcaggtggcatattacgccgagggcctcgggggggatgtggtgttgccg
gtggccggcgcgggggtcaggatgccgcggggcaaggtgggggaggcgttgctgaaggtg
atgaagggggagggggttgaccccgcggcttttttgaaaatgccaagaggcctaaaggcc
tacggctcgtaccgccgcgccaggctggaggtgggtgacttctcctacgctgttcggggc
agagacgtggagctccggtttgtcttgcccagggggagttacgccacggtgcttctgaga
gaggcggtgaagccggcggagccgtacagacatgggttttag
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