Pyrobaculum oguniense: Pogu_0479
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Entry
Pogu_0479 CDS
T01735
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pog
Pyrobaculum oguniense
Pathway
pog04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Pogu_0479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pog03019
]
Pogu_0479
03009 Ribosome biogenesis [BR:
pog03009
]
Pogu_0479
04131 Membrane trafficking [BR:
pog04131
]
Pogu_0479
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pog04147
]
Pogu_0479
Messenger RNA biogenesis [BR:
pog03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Pogu_0479
Ribosome biogenesis [BR:
pog03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Pogu_0479
Membrane trafficking [BR:
pog04131
]
SNARE
SNARE associated proteins
Others
Pogu_0479
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Pogu_0479
Exosome [BR:
pog04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pogu_0479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
Vps4_C
TIP49
AAA_28
IstB_IS21
nSTAND3
AAA_18
Mg_chelatase
RNA_helicase
AAA_24
Sigma54_activat
AAA_7
AAA_17
TsaE
ABC_tran
MazE_antitoxin
DUF815
AAA_lid_PRS2_C
Zeta_toxin
PhoH
AAA_19
ATPase
NPHP3_N
Parvo_NS1
AAA_30
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AFA38506
UniProt:
H6Q7S6
LinkDB
All DBs
Position
402198..404411
Genome browser
AA seq
737 aa
AA seq
DB search
MSEVILKVAEAKSRDVGRSIVRLPVRIMKRLGIEPGDYVEISGRKTAYAQVWPAYPEDED
KEIIRMDGIIRQNAGVGIGDTVKVKKAVLKPAQRVVLAPTEPVRVDPEYVKKQILLGKPV
ARGQAVDVPFYGGAIRFVVVQVQPGPAAYVSIDTEVTVREEPVKEAELTIPRITWEDIGD
LEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVA
INGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQL
LTLMDGLQERGQVVVIGATNRPDAVDPALRRPGRFDREIHIPMPDKRARREILAVHTRNM
PLCTKADVEAKVCNPGDEVDLDKIAEMTHGYTGADIAALAKEAAMAALRKAINKGMINIE
QDIIPQEVLSKLKVGMSDFLEAMKFVHPTVLREVIIEVPEVHWDDIGGYDAIKQELREIV
EWPMKYRHYFEELGVEPPKGILLFGPPGVGKTLFAKAVATESGANFIAVRGPELLSKWVG
ESEKAIREVFKKARMAAPCVIFFDEIDSIAPARGSRLGDSGVTDRMVNQLLAEMDGIGTL
KNVVVMAATNRPDILDPALLRPGRFDRIIYVPPPDIKARLEIFKVHTKKVKLANDVNLEE
LAKKTEGYTGADIAAVVREAAMLALRETIKERSVGAKPVSMKHFEEALKRIPPSLTPEDM
RRYEEVAKRLRRAIAGL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggttattcttaaagtagctgaggctaagtcccgcgacgtcggccgtagcatt
gttagattacctgtcagaattatgaaaaggcttggtatagaacctggcgactacgtggag
attagtgggaggaagacggcgtacgcccaagtgtggccagcgtatccagaagacgaggat
aaggagattattaggatggatggtataataaggcaaaacgccggcgttggtataggcgac
acggttaaggtgaagaaggcggttctgaagccggcgcagagagtggtgctcgcccccacc
gagcccgtcagggtcgacccggagtacgtcaagaagcagattctgctaggcaagccggtg
gcaaggggccaggcggtggacgtccccttctacggcggcgccatccgcttcgtggtggtc
caggtacagccaggtcccgccgcctacgtctccatcgacaccgaggtcacagtgagggaa
gagccagtcaaggaggccgagctgacgatccccagaatcacttgggaggacatcggagat
ttggaggatgctaagcagaagattcgggagcttgtggagcttcctcttcgccacccggag
ctttttaagcatcttggcattgagccgcctaagggtattctgttaattggccctcccggt
actgggaagacgcttttggcaaaggccgttgccaacgaggccaacgcctacttcgtggcc
ataaatgggccggagattatgtctaagtactacggcgagtctgaggctaggctgagggag
atattcgaggaggctaagaaaaacgccccggcgataatcttcatcgacgaaatagacgcc
atagcccccaagagggaggaggtgacgggggaggtggagaagagggtggtggcccagctg
ttgacattaatggacggactacaagaaagaggccaagtagtagtcataggagccaccaac
agaccagacgcagtagacccagcactaagaagaccaggaagattcgacagagaaatacac
atacccatgccggataagagggcgcggcgggaaatattggccgtccatactaggaatatg
ccgctgtgcactaaggccgatgtggaagccaaggtgtgcaaccccggcgacgaggttgac
cttgacaaaattgcagagatgacccacggctacaccggcgccgacatagcggctctcgcc
aaggaggcggccatggcggcgttgagaaaggcgataaacaaggggatgatcaacattgag
caggacataatcccccaggaggtgttgagcaagctgaaggtaggcatgtcagacttccta
gaagccatgaagtttgtccatcccaccgtgctccgcgaggtcatcatagaggtgccggag
gtgcactgggacgacatcgggggatacgacgcaattaagcaagagctgagggagattgtg
gagtggcccatgaagtaccgccactacttcgaggagctcggcgtagagccgccgaagggt
atactgcttttcggcccgccgggggttggaaagacgctgttcgccaaggctgtggccacg
gagtcgggggccaacttcatagccgttagggggccggagctcctctccaagtgggttggc
gagagcgagaaggcgatacgcgaggtgttcaaaaaggcccgcatggccgcgccgtgtgtt
atattcttcgacgaaatagactccatagcccccgccaggggatcgaggctcggggactcc
ggcgtgaccgaccgcatggtgaaccagttgctagcagagatggacggcattgggaccttg
aaaaacgtggtggtcatggcggcgacaaataggccggacatacttgaccccgccctgctg
aggcctgggcgctttgacaggattatatacgtgccgccgcccgacatcaaggcaaggctc
gagatctttaaagtgcacacaaagaaggttaagctggccaacgacgtcaatttggaagag
ctggcgaagaagactgagggctacacaggcgccgacatagccgccgtggtgagagaggcg
gctatgctggctttgagggagacgattaaagagaggagcgtcggcgcgaagcccgtgtcc
atgaaacacttcgaagaggcgttgaagagaataccgccgtcgcttacgccagaggacatg
aggcgctacgaagaagtcgctaagagactcaggcgggcaatagccggcttataa
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