KEGG   Pyrobaculum oguniense: Pogu_0649
Entry
Pogu_0649         CDS       T01735                                 
Name
(GenBank) Lhr-like helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pog  Pyrobaculum oguniense
Brite
KEGG Orthology (KO) [BR:pog00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pog03400]
    Pogu_0649
Enzymes [BR:pog01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Pogu_0649
    5.6.2.6  RNA 3'-5' helicase
     Pogu_0649
DNA repair and recombination proteins [BR:pog03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Pogu_0649
SSDB
Motif
Pfam: DEAD DEAD_assoc Helicase_C WH_Lhr ResIII Cas3-like_C_2 AAA_25 DUF3071 DEXQc_Suv3 CcmH HTH_23 Phage_XkdX AAA_19 UvrD-helicase
Other DBs
NCBI-ProteinID: AFA38676
UniProt: H6Q819
LinkDB
Position
544877..547663
AA seq 928 aa
MVFNLLHVAVREALKERGIEEPTEPQAKAIPEILEGNNVLIIAPTGSGKTEAAMLPILSK
MLEQGTENAGIYVLYITPLRALNRDLLDRIRWWGERLGFRVDVRHGDTDKADRQRQSKTP
PHILITTPEMLQAVMTGRRLLGHLKEVRWVVVDEVHELAEDKRGVQLSLALERLRYHVGR
DFQIVGLSATVGSPVEVAKFLMGVGRPFKIVMVNVVRNMQLDVVRPWPSEEDVKLAESSG
LFPDVVARLRLIKKLVEENRSTLIFVNTRSMAELLGFRLSYLFPDLPVAVHHSSLSKMVR
VSVEERLKKGDLKAVVATSSLELGIDIGHIDLVIQYISPHQVTRLLQRVGRSGHRLTAVP
KGVIIGEDINDVMEAAVVVKLAKNGFIEPTQIPYKPYDVLVNQIVAFLLLKPRWRLEELY
EIIKRAYPYRDLTIEELRRVVKFMQDLYPRLATYFEDSDTVARPRGRGFYRYFYETLSMI
PDERQYAVINSKTGELVGALDESFIAEYGNPGVKFIFRGRPWLITEVDDRSIKVVEVSDP
SGAIPSWIGEEIPVPYEVAQEVGRLRRRVREGATPEDIAREYHVNEETAKHIVEEVKKHE
GPLPDDKTVVVEQFRENVVIVHAAFGTLVNRTLGKLLGELLIRLLEKPVGVHQDPYGIII
QTSEALAAELVTEQLEKLAWMEVREIAELIKTALVKSGSFKRRLLHVAKRMGAVDKEADV
YSVSMSKLVEAFSGTPVFDEALREALERDLDLSHTVEVLQRIKAREVKILYSPQPTYLGE
VLYEKLSHRLEIIPPERLRRLVLDSTKARLLNYTMLGVCLECGWYGLVRVGEVYELRCPK
CGGENIGVVRVVRSDNLEREVRRNYEEVKKTAEILRRYGWLGLYVLASRLPLEAVQEVLA
QLDGADINAVTERIQELEKEYLKQRLLD
NT seq 2787 nt   +upstreamnt  +downstreamnt
gtggtctttaatctgcttcacgtcgccgtgagggaggccctcaaagagagggggatagag
gagcctaccgagccacaagcaaaggcgattccggagatcttggagggtaacaacgtattg
ataatagcccccactggtagcggtaagacggaagccgccatgttgccgatattgtccaaa
atgttggagcagggtactgaaaacgctggtatatacgtattgtacatcaccccgctgagg
gcgttgaacagagatctgcttgacagaataaggtggtggggagagaggctggggtttagg
gtggacgttaggcatggcgacacggacaaagccgataggcagaggcagagcaagactccg
ccgcacattctcatcaccacgcctgagatgttgcaagccgtgatgactggtaggagattg
ttgggacacctaaaagaggtgaggtgggttgtagtggacgaggtgcacgagcttgcagag
gataagaggggcgttcaacttagcctcgccttggagaggcttagatatcacgtagggcgg
gatttccagatagtggggttgtccgccactgtgggtagcccggtggaggtggcgaagttc
ctcatgggtgttggaaggccgtttaaaatcgtgatggtcaacgtagtgaggaacatgcaa
ctggatgttgtcaggccttggccgtctgaagaggacgtaaagctggccgagtcttcgggc
ttatttccggacgtcgtggcacgcctgcggctgataaagaagctcgtcgaggagaataga
tctacgctgatttttgtcaatactaggagcatggccgagttgctgggcttccgcctatca
tacctattcccagacctccccgtcgcggttcaccactcttctctatctaaaatggtgcgc
gtgtctgtagaggaaagactgaaaaagggcgatctaaaagccgttgttgcaacctctagt
ctggagctggggatcgacataggccacatagatttggtaatccagtacatttcgcctcac
caagtaaccaggctactccaaagagtggggcgaagtgggcacaggctaaccgcagtgcct
aagggggtgataataggcgaggatatcaatgacgtcatggaagccgctgttgttgtcaag
ttggctaagaatgggtttatagagccgacgcaaataccttacaagccctacgacgtctta
gtcaatcagatagtggccttcctcctccttaagccaaggtggaggctggaggagctctac
gaaattataaagagggcctacccctacagagaccttaccatcgaggagcttaggagagtg
gtgaagtttatgcaagatctatacccaaggcttgccacctatttcgaggacagcgacact
gtagcgaggccgaggggacgtggtttctaccgctatttctacgaaactctttcgatgata
ccagatgagaggcagtacgcggtgataaactccaagaccggcgagctggtaggggcgctc
gatgagtcgttcatcgcagagtatgggaatcccggcgtcaagtttatcttcaggggcagg
ccatggctaatcacagaggttgacgacaggagtataaaagttgtagaggtctctgaccca
agcggcgcgatccccagctggataggggaggagataccggtgccctacgaggtggcccag
gaagtcggcagactgaggagaagagtcagagagggggcgacccccgaagatatagctaga
gagtaccacgtaaatgaggagacagcaaagcacatagtggaggaagttaagaagcacgag
gggccgttgccggacgacaagacggtggtagttgagcaatttagagaaaatgtagtgata
gtacacgccgccttcggcactctagttaataggaccttgggcaaactactcggcgagctc
ttaattaggcttttggagaagcctgtaggggtgcaccaagacccctacggcataattatc
cagacgtctgaggcacttgcagccgagctcgtgactgagcagttggaaaagctggcatgg
atggaagtaagagaaatagcagagcttataaaaaccgccttggtgaagtcggggtctttt
aaacgtaggttgctacacgtggctaagagaatgggcgctgtggataaagaggccgacgtg
tatagcgtcagtatgtctaagctagtagaggcttttagcggcacgccggtattcgacgag
gcgttgagggaggcgctggaacgagacctagacctaagtcacaccgttgaggttctccag
cggataaaggctagggaggtgaaaatactctactcgccgcagcccacatacctgggcgag
gtgctctacgaaaagctgtctcacagacttgaaatcataccgccagaaaggctaaggagg
cttgtcctagacagcacaaaagccagactgcttaactacacaatgctcggcgtctgttta
gaatgcggctggtacggcttagtccgcgttggcgaagtttacgagctcaggtgccctaaa
tgcggcggtgagaacataggcgttgtaagagttgtgagaagcgacaacctagagcgggaa
gttcggcgaaattatgaagaggtgaaaaagacggcagagatcctccgcagatacgggtgg
ctgggcctatacgtcttggcgtcgcgcctacccctagaagccgtacaggaggtgttagcc
cagctagacggagccgatatcaatgcggtaactgaaagaattcaggaactggagaaggag
tatctaaaacaaagactgctcgattag

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