Pyrobaculum oguniense: Pogu_1334
Help
Entry
Pogu_1334 CDS
T01735
Name
(GenBank) peptide chain release factor 1, archaeal and eukaryotic forms
KO
K03265
peptide chain release factor subunit 1
Organism
pog
Pyrobaculum oguniense
Pathway
pog03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pog00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Pogu_1334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pog03019
]
Pogu_1334
03012 Translation factors [BR:
pog03012
]
Pogu_1334
Messenger RNA biogenesis [BR:
pog03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Pogu_1334
Translation factors [BR:
pog03012
]
Eukaryotic type
Release factors
Pogu_1334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
baeRF_family10
eRF1_1
eRF1_3
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-ProteinID:
AFA39361
UniProt:
H6Q8Y2
LinkDB
All DBs
Position
1149940..1151109
Genome browser
AA seq
389 aa
AA seq
DB search
MSFNRPPNGVYYIKTATELRAFVNVLKKFRGYATTLITLYINSERPIPDVLNLLRSEWST
AANIKDKTTRTHVQDTLERIINNLKGEAKAPENGMAIFAGFHMINQGNYEWVYYVVVPPQ
PIYTFKYICDTAFHTEILEEQLHAGVTYGIVVVERGEAVIALLKGGQWEVVKTVEFFVPG
KHHAGGQSANRFKRQTEHLAETFYKVLAEEVNKIFLQIPTLKGIIVAGPGPTKEDFLEEG
GLDYRLKDKVLAVVPACCANEYGVVEAIRNAQDQLKESEYVKAKEVMDKVMFYAVKKSDY
IVYGRDRTLKALQMGMAELVVIAEELGEDVVLDVVMKAEEKGIKVEVIPKGVEESKTLMQ
AFGGYVALLSTPVWVLEQQIAAEAATTTS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagctttaataggccgcctaatggcgtttactacataaagaccgccacggagctgagg
gcgtttgtgaatgtcttgaaaaagttccggggctacgccactaccctcatcactttgtac
atcaactcggagcgtcctatccccgatgtgttgaatctgctaagatcggagtggtccacc
gcggctaacattaaagacaagacgactaggacgcacgtccaggacaccttggagaggatt
atcaacaacctcaagggcgaggcgaaggctcctgaaaacggcatggccatcttcgcgggg
ttccacatgataaaccagggcaactacgagtgggtgtactacgtcgtggttccgccccag
cctatctacacgtttaaatacatctgcgatactgctttccacacggagatcctcgaggag
cagctacacgccggcgtcacctacggcatagtggtagtggagaggggagaggcggtgatc
gcgttgctaaaaggcgggcagtgggaagttgttaagactgttgagttcttcgtgccgggg
aagcaccacgcaggaggacagtccgccaaccgctttaagcgccagacagagcacttagcc
gagactttttacaaggtactggctgaggaggtcaacaagatattcttacagatccccacg
ctgaaggggatcatcgtggcggggcctgggcccacgaaggaggacttcttagaagagggg
ggcttggactaccgccttaaggacaaggttctggccgttgtacctgcgtgctgcgccaac
gagtacggtgtggtggaggctattagaaacgcccaggaccagctcaaggagagcgaatac
gtcaaggcaaaggaggttatggacaaggtcatgttctacgccgttaagaaaagcgactac
attgtatatgggagggaccgaacgcttaaggctcttcagatgggaatggcggagctggtg
gtaatcgccgaggaactcggcgaagacgtagttctcgacgtagtaatgaaggcggaggag
aagggaattaaagtagaagttataccaaagggtgtggaggagtccaagacgctgatgcag
gcatttggaggatacgtggcgcttctttcaacccccgtttgggttcttgagcaacaaatt
gcggcagaagccgccacaacaacgtcataa
DBGET
integrated database retrieval system
