Polynucleobacter paneuropaeus: DPM16_00465
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Entry
DPM16_00465 CDS
T05507
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
poh
Polynucleobacter paneuropaeus
Pathway
poh00300
Lysine biosynthesis
poh00470
D-Amino acid metabolism
poh01100
Metabolic pathways
poh01110
Biosynthesis of secondary metabolites
poh01120
Microbial metabolism in diverse environments
poh01230
Biosynthesis of amino acids
Module
poh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DPM16_00465 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DPM16_00465 (lysA)
Enzymes [BR:
poh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DPM16_00465 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Stu2_CTS
Motif
Other DBs
NCBI-ProteinID:
AWW43829
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All DBs
Position
complement(75377..76672)
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AA seq
431 aa
AA seq
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MTKVIPLPHLSGFTERNGVWYAEEIPLTNLAKEFGTPLYVYSKKALTEAYEAYDRACIDA
KGKRRARIHYAMKANSNLAVIDCFKNLGAGFDLVSGGELARALAIGAEPSSLVFAGVGKS
AAEITQALKAGVKCINVESIAELHKINRVAKGLNCRAPISLRVNPDVDAQTHPYISTGLK
GNKFGIAYYEVLKTYREAVQLSQIDIVGIDCHIGSQITTTEPYLDALDKVLDLVEQLKKE
GIIIHHLDLGGGLGIAYGAETPPDITEFTNALLDRIAERGFSHLDVILEPGRSLVGNAGV
LLTQVEYLKPGTEKNFCIVDAAMTELLRPALYEAHHGIVPIEKKSAKSVIYDVVGPVCES
GDWLGRDRALAVEEGDVLAILSAGAYGFVMASNYNTRPMPAEILVDGKNAYVVRERQKLV
DLFAHEKVPTK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagtcatccctctaccccacctcagcggatttacagagcgtaatggcgtttgg
tatgccgaagaaattccattaaccaatctcgcaaaagagtttggcactccgctttacgta
tacagcaagaaagcgctgacagaggcgtatgaggcgtatgatcgcgcctgcattgatgcc
aaaggcaaacgacgtgcacggattcattacgccatgaaagctaatagtaatttagcggtg
attgattgctttaaaaatcttggggctggttttgatctagtaagtggcggtgaattagct
cgagccctagccattggtgcagaaccttcaagcttagtatttgctggcgttggtaagtct
gcagcagaaattactcaagccctgaaagcgggagtgaagtgcattaatgtggaatcaatt
gcagagctccataaaattaatcgtgttgcaaaagggctgaactgccgcgcgccgatttct
ttacgcgtcaatccagatgtcgatgcacaaacccatccttatatctctactggattaaaa
gggaataagtttggaattgcttattacgaagttttaaagacctatcgtgaggcagttcaa
ctttctcaaattgatatagtcggcattgattgtcatattgggtctcaaattacaacaact
gagccatatcttgatgcgctcgataaagtattagatctagtcgagcaactcaaaaaagaa
ggcatcatcattcatcatttagatttgggtggtggcctcggaattgcttatggagccgaa
actccaccagatattacggagttcacgaatgcccttctcgatcgcattgccgagcgaggt
ttttctcacttagatgtgattctggagccaggccgatccctagttggtaacgctggggtt
ctattaactcaagtggaatacctcaagcctgggacagaaaaaaacttctgcattgtggat
gcagcaatgaccgagttattgcgccccgctttatatgaagcgcatcatggcattgtgcca
attgagaaaaagtccgctaagagtgttatctacgatgtcgttgggcccgtttgtgaatct
ggcgactggcttggaagagatcgtgcgcttgctgtcgaggaaggcgatgtattagccatt
ctttctgcgggtgcatatggttttgtcatggcctcaaactacaacacacgtccaatgcca
gccgaaatcttagtggatggaaaaaatgcttacgttgtacgagagcgtcaaaagctggta
gatctttttgcgcatgagaaagtaccaactaaatag
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