Polynucleobacter paneuropaeus: DPM16_01255
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Entry
DPM16_01255 CDS
T05507
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
poh
Polynucleobacter paneuropaeus
Pathway
poh03030
DNA replication
poh03430
Mismatch repair
poh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DPM16_01255
03430 Mismatch repair
DPM16_01255
03440 Homologous recombination
DPM16_01255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poh03032
]
DPM16_01255
03400 DNA repair and recombination proteins [BR:
poh03400
]
DPM16_01255
Enzymes [BR:
poh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DPM16_01255
DNA replication proteins [BR:
poh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DPM16_01255
DNA repair and recombination proteins [BR:
poh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DPM16_01255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AWW43972
LinkDB
All DBs
Position
230310..231368
Genome browser
AA seq
352 aa
AA seq
DB search
MVKTDAFQSHLKSLVAASAFHPLYVFSGDEPLLMMESIDLLRSKARQLGYTEREVMLQER
GFDWSALLNAGQTMSLFGDRRWIELRIPTGKPGRDGADALKQFSVQIASQSNADGPETIF
CIVLPRLDMKTKSSAWFSSLDEAGMAVQIDSLDRSHLPSWIAGRLQKQGQSIQSGPAGQR
ALEFIAEQVEGNLIAAHQEIQKLGLLYPAGELSEEQVRSAILKVARYNVFELSEAMLAGD
LPRVNRMLDGLKGEGEPLVLILWSVTEELRLLSKLKMASDAGESVQQLLRANRVWGNKER
LYPAALKRVQSSRLRQAVQIAAGLDRQSKGLQAAELPGDPWDGLRLVGNLLR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaaccgatgcctttcaatctcatctcaagtctttagttgccgctagcgctttt
catccgctgtacgtatttagtggagacgagcccttgctcatgatggaatcaatagatctc
ttgcgctctaaggcgagacagttaggctataccgagcgcgaagtgatgttgcaagagcgt
ggctttgattggagtgccttgcttaatgccgggcaaaccatgtctttgtttggagataga
cgttggatcgagcttcggattcccacgggcaaaccaggacgcgatggtgcagatgcgctc
aagcaattctctgtacagatcgcttcgcagtccaatgctgatggacctgaaacgatcttt
tgtatcgtgttgcctaggctagatatgaaaaccaagtcttccgcttggtttagtagtttg
gatgaagcagggatggccgttcagattgattctttagatcgtagccatttaccgagctgg
attgcagggcgtctgcaaaagcaaggacagagtattcaaagtggacctgcaggtcagcgt
gcccttgaatttatcgcagagcaggttgaaggtaatctgattgccgcccaccaagaaatc
caaaaactgggactcctatatccagccggtgaattatccgaggagcaggttcgttctgcc
attttgaaggttgcccgatataacgtatttgagctcagcgaggccatgctggcaggggat
ctgccccgtgttaatcgaatgctcgatggtcttaagggggaaggcgagcccttagttctg
attctttggagcgtaaccgaagagcttcggctactatctaagttaaagatggccagtgat
gcaggggaatctgttcagcagttgttgcgagcgaatcgggtttggggtaataaagaaaga
ctctatcccgcagcattaaagcgagttcagagttcccgattacgccaagccgtgcaaatt
gctgctggcttggatcgtcagtcaaagggattgcaagccgctgaacttcctggagatcca
tgggatggcttgcgtttagttggtaatttattgcgttaa
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