Polynucleobacter paneuropaeus: DPM16_01290
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Entry
DPM16_01290 CDS
T05507
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
poh
Polynucleobacter paneuropaeus
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poh03400
]
DPM16_01290
Enzymes [BR:
poh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DPM16_01290
DNA repair and recombination proteins [BR:
poh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DPM16_01290
Prokaryotic type
DPM16_01290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AWW43979
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All DBs
Position
complement(236969..238441)
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AA seq
490 aa
AA seq
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MQKALVWLRRDLRLYDNAALHHALKSSQQVWVVFIFDATILSPLLKQGLNEQGLRPDRRV
DFIWQGIEQLDQELRKQGGGLIVQFGKPTECIPQIAKELGVETVFTNHDYEPTAIARDEH
IQSSLAKSGIAFESFKDQVIFEKKEILTNSNTVFSVFTPYKNNWLKTMQAKDLEPYDCNA
KKGQYAAIPANLNQGIPSLESMGFIKTGIETYLPPGAAGGQHFLEDFLHRIDQYQIGRDF
PAIKGVSYLSTHLRFGILSIRGLVREAHRRMLAGSMGATIWLSELIWRDFYFMILANHPR
LAKGEAFKPDYDKITWESGALAKKLFTAWCEGKTGYPLVDAAMHQLNQSGYMHNRLRMVV
ASFLTKDLGIDWRWGEAYFAEHLNDFELSSNNGGWQWASSSGCDAQPYFRIFNPITQSEK
FDSEGKFIRRYLPQLEKLSNKSIHAPWLAGHIELEAAGLLLGRDYPLPVVDHDEARKKTL
VRYSVVKKPA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagcactcgtttggctccgtcgagacctccgcctatatgacaatgcggccctc
catcacgctctaaagagcagccaacaagtttgggtggtctttatctttgatgccactatt
ttgtcgcctctgcttaaacaaggcctaaatgaacaaggattaaggcctgatcgccgggta
gatttcatttggcaaggtatagagcagctagatcaagagctccgaaaacaaggtggtgga
ctcattgttcaatttggtaagccaacggaatgcattccacaaatcgccaaagagcttggt
gttgaaaccgtttttactaatcatgattacgagccaacggccattgcgcgtgatgaacac
attcaatcctctctcgcaaaatcaggtattgcctttgaaagcttcaaggatcaagtcatt
ttcgagaaaaaggaaattctgaccaactccaataccgttttctcagtcttcactccttat
aaaaataattggctgaagactatgcaagcaaaagatctggagccatacgactgcaatgct
aaaaaaggtcaatatgcagcgatcccagcaaatctaaatcaaggcattccgtcattagag
tcgatgggattcatcaaaactggcattgaaacctatttgcctccgggcgcagcaggtggt
caacattttctagaagattttttacaccgcattgatcaatatcaaattggtagagatttt
cccgccattaaaggcgttagttatttatcaactcacctgcgttttggcatactgtccatt
cgtggcttggttagagaagcccatcgtcgtatgttggcaggaagtatgggggcaaccatt
tggttaagtgagcttatctggcgtgatttttatttcatgattctggctaatcacccccgc
ctcgcaaagggagaagcttttaaacccgactacgacaaaattacttgggaaagtggtgcg
cttgctaagaaactctttacggcttggtgcgagggcaaaacaggctatcccttagtggat
gcagcaatgcatcaactcaatcaaagcggctatatgcataatcgactccgtatggtcgtg
gccagctttctaactaaggatcttgggattgactggcgctggggtgaagcctactttgct
gagcacctgaatgactttgagctatcgtccaataatggcggttggcaatgggcatcctct
tcgggatgtgatgcgcagccctactttcgtattttcaatcccattactcagtctgaaaaa
tttgactcagagggtaaatttattcggcgctatctcccacagcttgaaaaactctccaat
aagtcgattcatgcgccctggctagctggtcatattgaactcgaagctgcagggctgctt
ctggggcgtgactacccattaccggttgttgaccatgatgaagcccgtaaaaagacgctc
gttcgctatagcgtagttaaaaaacccgcttag
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