Polynucleobacter paneuropaeus: DPM16_01350
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Entry
DPM16_01350 CDS
T05507
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
poh
Polynucleobacter paneuropaeus
Pathway
poh00521
Streptomycin biosynthesis
poh00523
Polyketide sugar unit biosynthesis
poh00525
Acarbose and validamycin biosynthesis
poh00541
Biosynthesis of various nucleotide sugars
poh01100
Metabolic pathways
poh01110
Biosynthesis of secondary metabolites
poh01250
Biosynthesis of nucleotide sugars
Module
poh_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DPM16_01350 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DPM16_01350 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DPM16_01350 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DPM16_01350 (rfbB)
00525 Acarbose and validamycin biosynthesis
DPM16_01350 (rfbB)
Enzymes [BR:
poh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DPM16_01350 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
RmlD_sub_bind
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AWW43991
UniProt:
A0AAE2YLI1
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All DBs
Position
248079..249137
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AA seq
352 aa
AA seq
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MILVTGGAGFIGGNFVLDWLDNPSAEGIINLDKLTYAGNLTTLDSLQDDSRHIFIHGDIA
DKALVTELLGQYQPRAIVNFAAESHVDRSIHGPAEFIQTNILGTFNLLECAREYWNEMDE
SVQKQFRFHHVSTDEVYGSLSLTDPAFTETNPYEPNSPYSASKAASDHLVRAWFHTYGFP
VVTTNCSNNYGPYHFPEKLIPLVILNALAGKPLPIYGDGQQIRDWLYVGDHCSAIREVLA
KGKLGETYNIGGWNEKPNIEVVKTICHILDELKPRLDAKSYAEQITFVKDRPGHDRRYAI
DASKIERDLGWRPAETFDSGIRKTVQWYLDNPVWVEGVVSGSYRDWLQKQYQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgattttagtaacgggtggcgctggttttattggtggtaattttgtcttggactggttg
gacaatccgagtgctgaaggcattattaatctagataaattaacctatgcaggtaattta
accactttagattctcttcaagatgattcgcgtcatatttttattcatggcgatatagct
gacaaggccttagtaacagaacttttgggccaatatcaacctcgcgctattgtcaatttt
gctgccgagagtcatgtggatcgctccattcatggtccagcagagttcattcagactaat
atcttgggcacatttaatcttctggagtgcgcgcgtgaatattggaatgagatggatgaa
tctgttcaaaagcagtttcggtttcaccatgtttcgactgatgaagtttacggctcactt
tcactgactgatcccgcattcactgaaacaaatccctacgagcctaatagcccatactct
gcctccaaagcagcctcagaccacttagtgcgtgcttggtttcatacctatggcttccca
gtggtgaccaccaattgctcaaataattatggcccttatcactttcctgaaaaattaatt
cctctagtaatcctcaacgcacttgcaggtaagcccctgccaatttacggtgatggtcaa
caaattcgagactggttgtatgtaggtgatcattgttcagcaatccgcgaggttttagcc
aagggcaaactgggtgaaacctataacattggtggctggaatgagaagcctaatattgag
gtggtaaaaaccatctgccatattcttgatgagctaaagcctagattagatgccaagtct
tatgctgagcaaattactttcgtcaaggaccgtccaggtcatgatcgtcgctatgccatt
gatgcttccaaaattgagcgtgacttaggttggcgtcctgcagaaacttttgattcgggt
atccgaaaaacagttcagtggtatttagataatccagtatgggttgagggtgtggtaagc
ggctcttatcgcgactggctacaaaaacaataccaataa
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