Polynucleobacter paneuropaeus: DPM16_01350
Help
Entry
DPM16_01350 CDS
T05507
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
poh
Polynucleobacter paneuropaeus
Pathway
poh00521
Streptomycin biosynthesis
poh00523
Polyketide sugar unit biosynthesis
poh00525
Acarbose and validamycin biosynthesis
poh00541
O-Antigen nucleotide sugar biosynthesis
poh01100
Metabolic pathways
poh01110
Biosynthesis of secondary metabolites
poh01250
Biosynthesis of nucleotide sugars
Module
poh_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DPM16_01350 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DPM16_01350 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DPM16_01350 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DPM16_01350 (rfbB)
00525 Acarbose and validamycin biosynthesis
DPM16_01350 (rfbB)
Enzymes [BR:
poh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DPM16_01350 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
RmlD_sub_bind
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AWW43991
LinkDB
All DBs
Position
248079..249137
Genome browser
AA seq
352 aa
AA seq
DB search
MILVTGGAGFIGGNFVLDWLDNPSAEGIINLDKLTYAGNLTTLDSLQDDSRHIFIHGDIA
DKALVTELLGQYQPRAIVNFAAESHVDRSIHGPAEFIQTNILGTFNLLECAREYWNEMDE
SVQKQFRFHHVSTDEVYGSLSLTDPAFTETNPYEPNSPYSASKAASDHLVRAWFHTYGFP
VVTTNCSNNYGPYHFPEKLIPLVILNALAGKPLPIYGDGQQIRDWLYVGDHCSAIREVLA
KGKLGETYNIGGWNEKPNIEVVKTICHILDELKPRLDAKSYAEQITFVKDRPGHDRRYAI
DASKIERDLGWRPAETFDSGIRKTVQWYLDNPVWVEGVVSGSYRDWLQKQYQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgattttagtaacgggtggcgctggttttattggtggtaattttgtcttggactggttg
gacaatccgagtgctgaaggcattattaatctagataaattaacctatgcaggtaattta
accactttagattctcttcaagatgattcgcgtcatatttttattcatggcgatatagct
gacaaggccttagtaacagaacttttgggccaatatcaacctcgcgctattgtcaatttt
gctgccgagagtcatgtggatcgctccattcatggtccagcagagttcattcagactaat
atcttgggcacatttaatcttctggagtgcgcgcgtgaatattggaatgagatggatgaa
tctgttcaaaagcagtttcggtttcaccatgtttcgactgatgaagtttacggctcactt
tcactgactgatcccgcattcactgaaacaaatccctacgagcctaatagcccatactct
gcctccaaagcagcctcagaccacttagtgcgtgcttggtttcatacctatggcttccca
gtggtgaccaccaattgctcaaataattatggcccttatcactttcctgaaaaattaatt
cctctagtaatcctcaacgcacttgcaggtaagcccctgccaatttacggtgatggtcaa
caaattcgagactggttgtatgtaggtgatcattgttcagcaatccgcgaggttttagcc
aagggcaaactgggtgaaacctataacattggtggctggaatgagaagcctaatattgag
gtggtaaaaaccatctgccatattcttgatgagctaaagcctagattagatgccaagtct
tatgctgagcaaattactttcgtcaaggaccgtccaggtcatgatcgtcgctatgccatt
gatgcttccaaaattgagcgtgacttaggttggcgtcctgcagaaacttttgattcgggt
atccgaaaaacagttcagtggtatttagataatccagtatgggttgagggtgtggtaagc
ggctcttatcgcgactggctacaaaaacaataccaataa
DBGET
integrated database retrieval system