Polynucleobacter paneuropaeus: DPM16_01880
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Entry
DPM16_01880 CDS
T05507
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
poh
Polynucleobacter paneuropaeus
Pathway
poh00020
Citrate cycle (TCA cycle)
poh00480
Glutathione metabolism
poh00720
Other carbon fixation pathways
poh01100
Metabolic pathways
poh01110
Biosynthesis of secondary metabolites
poh01120
Microbial metabolism in diverse environments
poh01200
Carbon metabolism
poh01210
2-Oxocarboxylic acid metabolism
poh01230
Biosynthesis of amino acids
poh04146
Peroxisome
Module
poh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
poh_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DPM16_01880
09102 Energy metabolism
00720 Other carbon fixation pathways
DPM16_01880
09106 Metabolism of other amino acids
00480 Glutathione metabolism
DPM16_01880
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DPM16_01880
Enzymes [BR:
poh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
DPM16_01880
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Gene cluster
GFIT
Motif
Pfam:
IDH
Talin_IBS2B
Motif
Other DBs
NCBI-ProteinID:
AWW44084
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Position
339539..341773
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AA seq
744 aa
AA seq
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MAAGKSKIIYTLTDEAPLLATGSFLPIIRAFTAPAGVEVAESDISVAARILAEFSDCLTP
EQKVNDNLAELGKLTLLPDTNIIKLPNISASVPQLLAAIKELQAKGYALPNFPEDPKSDA
EKSIRARYSKCLGSAVNPILREGNSDRRAPNAVKQFARKHPHSMGEWSQASRTHVSHMHG
GDFYAGEKSMTLTKACEVKMDLVTKSGKTIVLKSKMPLQAGEIIDSMFMSKKALCEFYEK
EIEDAYKTGMMLSLHVKATMMKVSHPIVFGHAVKIFYKEAFAKHAKLFEELGVNANNGMS
SFYDKIKTLPESKREEIIQDLHACHEHRPALAMVDSAKGITNLHSPSDVIVDASMPAMIR
VGGKMWGADGRLHDTKAVIPESTFARIYQEIINFCKTHGNFDPTTMGTVPNVGLMAQQAE
EYGSHDKTFEIPEAGVARIVTEEGAVLLEQNVEEGDIWRMCQAKDAPIRDWVKLAVNRAR
LSNTPAVFWLDEYRPHEAELIKKVKTYLQDYDLTGLDIQIMSQTRAMRYTLERVIRGKDT
ISVTGNILRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLFETGAGGSAPKHVQQLVEENH
LRWDSLGEFLALAVSLEDISDKTGNAKAKILAKTLDEATGKLLDNNKSPSPRTGELDNRG
SQFYLAMYWAQALAAQTEDKELQAHFAPIAKALVEQESKIIDELKAVQGKPADIGGYFKP
DPVKFAAVMRPSPTLNAIIDKAAA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagggaaatcaaaaattatttatacgctgaccgatgaggcaccacttttagct
accggttcatttttacccatcattcgagcatttacagcgccagcaggtgttgaggttgcc
gaaagcgatatctctgtagcggccagaatcttggctgagttttctgactgtttaacgcct
gagcaaaaggtcaatgacaacttggcggaattgggcaagttgaccttattacccgatacc
aacattattaagttgcccaatatcagcgcttcggtaccgcaactactggcagcgattaaa
gaactccaagccaagggctatgctttgccgaattttccagaagatcccaagagtgatgca
gaaaaatcgattcgggcacgttactcaaagtgtttaggtagcgcagttaacccaatatta
cgtgagggtaactctgatcgtcgcgcaccgaatgcagtaaaacagtttgctcgtaaacat
ccgcattcaatgggcgagtggagtcaagcttcccgcacgcacgtttcacatatgcatggt
ggggatttctacgccggtgaaaaatcgatgacactcacaaaagcatgtgaagtcaaaatg
gatttagtcaccaagagtggcaaaaccattgtgctgaagtccaaaatgcccctacaagct
ggcgaaattattgacagcatgttcatgagtaagaaagccttgtgcgagttctatgaaaaa
gaaattgaagatgcatataaaactggcatgatgctgtccttgcacgtcaaggccaccatg
atgaaggtttcccatcccatcgtatttggtcatgctgtcaagattttctataaagaggct
tttgcaaaacacgctaagttgtttgaagagctaggtgttaatgccaataacggcatgagc
agcttctatgacaagatcaaaactttgcctgagtctaagcgtgaagagattattcaagat
ttgcatgcatgccatgagcaccgtcctgccttggcgatggtggactcggctaaagggatt
accaatttacattcaccaagcgacgtgattgtggatgcttcgatgcctgcgatgattcgt
gtaggcggcaagatgtggggtgccgatggtcgtttgcatgatacgaaagccgtaatacca
gagagtacttttgcccgaatttatcaagagattattaacttctgtaagactcacggtaat
tttgatcccaccacgatgggcaccgtaccgaacgtgggcttaatggcccagcaggcagaa
gagtacggctcacacgataagacctttgaaattcctgaagctggtgtagcgcgcattgtg
actgaagagggtgctgtcttgcttgagcaaaatgtagaagagggtgatatctggcgtatg
tgtcaggcgaaagatgcgccaatacgagattgggtcaaattggctgtgaatcgtgcacgt
ctctctaatacacctgcagtcttctggttagacgaataccgccctcacgaagctgagctc
attaagaaagttaaaacctatttacaagattacgatctaacgggtttagatattcagatc
atgtcgcaaacgcgtgcaatgcgttacaccctagagcgcgtcattcgcggtaaggacacc
atttcagtcactggcaacatcttgcgtgactacttaacggatttattccccatcatggaa
cttggcaccagtgccaagatgttatcgattgtgcctttgatggctggtggtggtttattt
gaaaccggtgcgggaggttcagcacctaagcacgttcaacagctcgttgaagagaatcat
ttgcgctgggattccctaggcgaattcttagctttggcagtctctctcgaagatatcagc
gataagacgggcaatgcgaaagcaaaaattctagcgaagactttggacgaggcgaccggt
aagttgctggataacaataaatcaccttctcctcggactggtgaactcgataatcgcgga
agtcagttttatttggcgatgtattgggctcaagcattggctgctcagactgaagataaa
gagctgcaagcacactttgccccaattgcaaaagcattggtcgagcaagaaagcaaaatc
attgatgaactcaaggcggttcagggcaaaccagcggatattggtggttacttcaaacct
gatccagttaaatttgctgcagtgatgcgcccaagcccaaccctgaatgccattattgat
aaggcagcagcgtag
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