Polynucleobacter paneuropaeus: DPM16_02800
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Entry
DPM16_02800 CDS
T05507
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
poh
Polynucleobacter paneuropaeus
Pathway
poh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DPM16_02800 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
poh01007
]
DPM16_02800 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
poh03016
]
DPM16_02800 (lysS)
Enzymes [BR:
poh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
DPM16_02800 (lysS)
Amino acid related enzymes [BR:
poh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DPM16_02800 (lysS)
Transfer RNA biogenesis [BR:
poh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DPM16_02800 (lysS)
Prokaryotic type
Other AARSs
DPM16_02800 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AWW44251
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All DBs
Position
complement(532114..533658)
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AA seq
514 aa
AA seq
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MNDKANPQANPEPLDENHIIAERREKLAKLREAGVPFPNDFVPTHLSADLHAHYDSLTKE
ELAAKKVHVKVAGRMVLKRVMGKASFATIQDRSGQIQFYISDEISGADTHGAFKHWDMGD
FIAAEGYLFKTNKGELSVESSNLRLLSKSLRPLPDKFHGLSDLETKYRQRYVDLIVNPES
RNTFKARSNAIASLRRHMLDADFMEVETPMLHPIPGGATAKPFITHHNALDMQMFLRIAP
ELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEGLIRA
AAIDAQGTAILTHQGRELDLSKPFQRLTITEAILKYGPQSNKQYQTAQLEDADFIRTELK
KGGENPDSPTLKNAGIGALQLALFELVAEEHLWEPTYIIDYPIEVSPLARESDTRPGVTE
RFELFITGREIANGFSELNDAEDQANRFRKQVEQKEAGDEEAMYFDHDFIRALEYGMPPT
GGCGIGIDRLVMLLTDAPNIRDVILFPHLRREEE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataaagccaacccgcaagctaatccagaaccccttgatgagaatcacatcatt
gccgagcgacgtgaaaaattagctaagctgcgagaagctggcgttcctttcccgaatgat
tttgtaccaacgcatttatcagcagatttgcatgcgcattacgatagcctcactaaagaa
gaattagctgccaagaaagttcatgtcaaagtggcaggccgcatggttcttaagcgcgtg
atgggtaaagcaagctttgccaccattcaagaccgaagtgggcaaattcagttctatatc
agtgatgaaattagtggggctgatactcatggcgcatttaagcactgggatatgggagac
tttattgctgccgaaggctatctttttaagaccaataaaggtgaactctctgttgagagc
agcaatctgcgtttgctcagcaaatccttacgtcctctgccagataaattccatggacta
tctgatttagagactaaataccgtcaacgttatgttgatttaattgtgaatccagagagt
cgtaatactttcaaggcaagaagtaatgcgattgcctcattacgtcgtcacatgcttgat
gccgatttcatggaagtagagacgcccatgctccaccctattccagggggtgcaactgca
aagccttttatcacccatcacaatgctttagatatgcagatgtttttgcgtatcgcacca
gagctctatttaaagcgtttaattgtcggtggatttgaacgcgtatttgaaatcaatcgt
aacttccgcaacgaaggcgtgagcccgcgccataaccctgagttcacaatgatggagttc
tatgcggcctataccgactatcggtggctgatggactttaccgaaggacttattcgtgct
gcagcaatcgacgcacaaggcactgcaatcttgacccatcaaggacgagaactggattta
agtaaaccctttcagcgcttgactattactgaggcgattctgaaatacggtccccagtca
aataaacaatatcaaacggcacaactcgaagatgccgacttcattcgcactgagttgaaa
aaaggtggtgagaatcctgattctccgaccctgaagaatgcaggtatcggcgctcttcaa
ttagccttgtttgaattggttgccgaagaacacctctgggagcccacttacatcattgat
tacccgattgaggtgagccctctcgcccgcgaatcagacactcgtccgggcgtcaccgag
cgctttgagttattcatcaccggtcgtgagattgccaatggtttctcagagctcaatgac
gcagaagatcaagccaatcgcttccgtaagcaggtagagcaaaaagaagctggtgatgaa
gaggcaatgtacttcgaccatgactttattcgtgcactggaatatggcatgcctcctact
ggcggttgcggtatcggcatcgatcgtctggtgatgttactaaccgatgcacccaatatt
cgggatgtgattctgttcccgcacttacgtcgcgaagaagagtaa
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