Polynucleobacter paneuropaeus: DPM16_03345
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Entry
DPM16_03345 CDS
T05507
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
poh
Polynucleobacter paneuropaeus
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poh03400
]
DPM16_03345
Enzymes [BR:
poh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DPM16_03345
DNA repair and recombination proteins [BR:
poh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DPM16_03345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
LuxT_C
Motif
Other DBs
NCBI-ProteinID:
AWW44353
LinkDB
All DBs
Position
638133..641132
Genome browser
AA seq
999 aa
AA seq
DB search
MPQPFPTLNAEKQVKTWAIEPNAKALEQLANGIWECAINTEQRPLVVLSTAGPLIGLRKV
LEQQRPKDLSPQIALLPQVISMSDWLESAPGAWKFPKKPSDLERWLSVYVNLRKHKILQS
WFKAESEAGAWGLAQAVIDACDALTEAVIPQLQNELNALVQGQSIDTEQWLKKVELVLDQ
AIAKAYVGLSRNVVDQESAVLLTFWRYLSSVHDPVVRKHLAMAVHLQVAKIQANAGVQAR
PLVWVQTADPKPIEQELIASYLDSYAQYAPVIKVDQDWQTVALWSEALTGEDQEGNIAPA
NETIDSQISQNLQTQRHDEWQLLAARRFEELAWAAAKSIEKHLIDGKQNIALVAQDRLAA
RRTRALLGRLGDALRIRDETGWKLSTTRAAAAFDSWLELIRAPKEGPSASALLEFLQNPY
FDLALSLKQAPEACKGLIAQLEDILIASQAKSGWEIFKMAIERANLYATAHGGSANQTLL
DLIEYIQKRHLLWQQPQLECASAYQHLQKNLEDLGMVERLKQDSAGEQLLEVLEQFNLSN
GPFQEVKMTLPEWLSLIKTVIEEASYEEAGKEALATLSILPLSSTRLRQFDAVVLVGCDE
QQLPAFAEPPLFFSDTLNRYLKSSTINAQYIQQSRDLSSLLVSCPNTDLLWQSKSKSGEP
LRPSAWIQRLQAQLDWPTIDVSPETYEGKSNPIQMAVSTPDPNLAIPVTVTPSAYKALRD
CPYRYYVSSLLGLRKAKEFEEGFDASLAGQTLHALLKNFFQALKTEEGKTHSPIHQGIDA
RRQWMETQLNKYSEKEFERLIAGDARVLGTLRDWQKQIPTFVDWQLKREAKGWQYHDAEL
PIGFTIRLTDPDGVERDIQIAGRADRFDINIHDKTAASVIDYKNQAIKKIIDRSKNVLDD
PQLLIYARAVNENAPAAHLSGRTIEQAEWVTLKVDLKKSEEKMVRDHLVEELPLKMEEFS
KQLSRDLEDLWARKPMKAFAPDSVCQYCEARGICRKGMW
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaacccttcccaaccctcaatgctgaaaaacaggtaaaaacttgggccatcgag
cctaatgccaaggcattagagcaactggcaaacggcatttgggaatgcgctatcaatacc
gagcagaggcccttggtcgttctcagtactgcaggaccactcattggactgagaaaagtt
ctggagcagcaacgacccaaagatctcagtccccagattgcactcttgccacaagtgatc
agcatgagtgattggctagagtcagcaccaggcgcatggaagtttcctaagaaaccatcg
gatctagagcgctggctcagtgtctacgtcaatttgcgcaagcacaaaattttgcaaagc
tggtttaaagccgagagtgaagcgggagcatggggcttagcgcaagcagtgattgatgca
tgtgacgccttaaccgaagcagtgattccacaattacaaaacgagctcaatgcattagtg
caaggacaatccattgataccgagcagtggctcaaaaaagtggagctcgtactagaccaa
gcaattgctaaagcctatgtcggactatcgcgtaatgtggtggatcaagaatctgcagtg
ttacttactttctggcgttatctcagcagcgtgcatgatcccgtggtacgaaaacatctg
gcgatggcggtccatctgcaagtggctaagattcaagcaaacgcaggcgtgcaagctaga
ccgctggtttgggtgcaaaccgccgatccaaagcccattgagcaagagctaattgccagc
tatctcgacagttatgcgcaatatgctccagtgataaaggttgatcaggattggcagaca
gtagccctgtggtctgaagcgctaacaggtgaagatcaagagggcaatatcgcacctgca
aatgaaacgatcgattcgcaaataagtcagaacctacagacacagcgtcatgatgagtgg
caactcttggctgctagacggtttgaagagttagcctgggcagcagccaaatcgatcgaa
aaacatttaatcgatggcaagcagaacattgcattggtcgcacaggatcgcttagcagcg
agaagaacccgtgccttactaggtcgcctaggtgatgcactacgtattcgagatgaaacc
ggttggaagttatccaccacccgtgccgcagcagcctttgatagctggctagagctgatt
cgggctcccaaagaaggcccgagtgccagcgccttattggagttcttgcaaaacccatat
tttgatttggcgctcagcctgaaacaagcaccagaagcctgtaaaggattaattgctcaa
cttgaagacattctgattgctagtcaagccaagtctggttgggaaattttcaaaatggcg
atcgagagagccaatctctatgccaccgctcatggcggctcagccaatcaaacactatta
gatctgattgaatacattcagaaacgacacctgctttggcagcagccccaactcgagtgc
gcgagtgcttatcaacacttgcaaaagaatcttgaagacctcggaatggtagagcgtctc
aagcaagactcagcaggagagcaattattagaagtgcttgaacaatttaatttgagcaat
ggcccattccaagaagtgaagatgactttgccagagtggctaagtctgatcaaaaccgtg
attgaagaagcgtcgtatgaagaggcgggcaaagaagcgctggcgacactcagtatcctg
ccactgagctcaactcgactcagacaatttgatgctgttgtgttggtggggtgtgatgag
caacagcttcctgcatttgcagagccaccgctatttttctcggatacgctaaatcgctat
ctcaaatcctctacgatcaatgcacaatatattcaacaatcccgagacctctctagtctc
ttggtgtcttgtccaaacaccgacttactttggcagagtaagagcaagagtggtgaaccg
ctcagaccttcagcctggattcagcgcttacaagcccagcttgattggccaacgattgat
gtcagtcccgaaacctatgaaggtaaatcgaatccaattcagatggcagtcagcacccct
gatcccaatttagcgatccccgtgactgtgacaccaagcgcttataaagccttacgtgat
tgcccctatcgctattacgtcagcagcctactaggcctacgtaaggcgaaagaattcgag
gaaggttttgatgcttctttggcggggcagaccttacatgctttattgaaaaacttcttc
caagctcttaaaacagaagagggtaagactcattcacctattcatcagggaatagatgcc
cgtcgccagtggatggaaacccagctaaacaaatattctgaaaaagagttcgagcgcctg
attgcgggtgatgccagagtattgggaacactgcgcgattggcaaaaacaaatcccgact
tttgtcgattggcagctcaaacgcgaagcaaagggctggcagtatcacgacgcagagtta
ccgattggtttcacgatccgtttgactgatcccgatggagtagagcgcgatattcaaata
gccggacgggccgatcgattcgatatcaatattcatgacaagacagcagcttctgtcatt
gactacaaaaatcaggctattaaaaagatcatcgatcgctccaaaaatgttttagacgat
cctcagcttctgatctacgctcgagccgtgaatgaaaatgcgccagcagcgcatttatct
ggaagaacgatagagcaagcagagtgggtcacgcttaaggtagatttgaaaaagtcagaa
gagaagatggtcagagaccacctagtagaagagctcccactgaagatggaggagttctcc
aaacaactcagtagggaccttgaagacttgtgggcgcgtaaacccatgaaagcctttgca
cccgacagcgtatgccaatactgtgaagcccgcggcatttgcagaaaggggatgtggtga
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