Polynucleobacter paneuropaeus: DPM16_03410
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Entry
DPM16_03410 CDS
T05507
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
poh
Polynucleobacter paneuropaeus
Pathway
poh03030
DNA replication
poh03430
Mismatch repair
poh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DPM16_03410 (dnaX)
03430 Mismatch repair
DPM16_03410 (dnaX)
03440 Homologous recombination
DPM16_03410 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poh03032
]
DPM16_03410 (dnaX)
03400 DNA repair and recombination proteins [BR:
poh03400
]
DPM16_03410 (dnaX)
Enzymes [BR:
poh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DPM16_03410 (dnaX)
DNA replication proteins [BR:
poh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DPM16_03410 (dnaX)
DNA repair and recombination proteins [BR:
poh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DPM16_03410 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_16
RuvB_N
AAA_14
AAA_5
AAA_2
AAA_22
AAA_19
Glyco_tranf_2_5
AAA_30
AAA_18
nSTAND3
Mg_chelatase
AAA_24
RCF1-5-like_lid
TsaE
PIF1
SKI
RNA_helicase
AAA_assoc_2
AAA_28
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AWW44365
LinkDB
All DBs
Position
651537..653150
Genome browser
AA seq
537 aa
AA seq
DB search
MTALALARSWRPKTFSQLVGQDHVVKALTHALDQGRLHHAWLFTGTRGVGKTTIARIMAK
ALNCIGEDGQGKMTSTPCGKCSACLAIDQGRFVDYIEMDAASNRGVDEMAALLEKAAYAP
SNARYKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTILSRCLQFNL
KQMPVPLIVEHLEKVLAAEKVDYETNALRVIAKAGQGSMRDALSLTDQAIAYAAGKVTEE
SVRGMLGTLDDAYLIRILDALVSKDGATLLNISNEMGERSMSFSLALQDLSSLIQKIAAA
QIVPESVLEDWPEATEVRRLAKIFTKEEAQLFYQISITSRPDLSLAPDEQTGFAMALLRM
LAFRPAGSEPQAARSNTVANTAPARPAMPSNRSEPRAAAPASPKPPAASSDRPDWHTLMR
ALPVKGLVQQLAFQTELQDWADSATGIKARIVTPTPSLASDASVARLTEVLTAHFGKPIK
LTIEKGEVEGKSVAKIDAAIHQEKRQTAEQLIAADPFIQALEKEFGAKVVGGSVKPL
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgactgcattggcactagcccgttcgtggcgccctaaaactttttcccaattggtagga
caagaccatgtggtcaaggctttgacccatgctttggatcagggacgcctacatcacgct
tggctctttaccggcacccgcggagtgggtaaaaccacgattgcccgcattatggctaaa
gccctcaattgcatcggcgaagatggtcaaggaaaaatgacctcgacaccttgtggcaaa
tgctctgcctgcctcgcaatcgatcaaggtcgctttgttgactatattgagatggacgcc
gccagtaatcgtggtgtggatgagatggctgctctattagagaaagccgcctacgcaccc
agcaatgctcgatacaaggtctacatgattgacgaggtgcacatgctcaccaatcatgcc
tttaatgccatgctcaagacgctcgaggagccaccagagcacgtcaagttcattcttgcc
acaactgatccccaaaagattcccgtcacgattttgtctcgctgcttgcagttcaatctc
aagcaaatgccagtacccctgattgttgagcatttggagaaagtgcttgctgcagaaaaa
gtcgattacgaaaccaatgcactgcgcgtgattgcaaaagcaggtcaaggctcaatgcgc
gatgctttatcgctgacggaccaagcgattgcgtatgccgctggcaaagtcactgaagaa
tctgtccgcggcatgcttggtacattagacgatgcgtacctcattcgtattctggatgca
ctagtcagtaaagatggcgcaactttacttaatattagtaatgagatgggtgagcgcagt
atgtctttctcattagcattacaagatctatcgagtttgattcagaagattgctgctgcg
caaattgttccagagtcggtattagaagattggcccgaagcaacagaagtacgccgccta
gccaaaatcttcaccaaagaagaagcgcaactcttttatcaaatcagcatcaccagccgt
cccgacttatcactcgcaccagatgagcaaacgggctttgctatggcattgctacggatg
ctggcatttagacctgctggctcagagcctcaagctgctagatcaaatacagtggcaaac
acagcgcccgctagaccagcgatgccaagtaatcgctctgaacccagagctgctgctccc
gctagcccaaagcccccagccgcatcaagcgatcggccagattggcataccctaatgcgc
gctttacccgtgaagggattggtacagcagttggcttttcagacagagttacaagactgg
gccgattcagcgacagggattaaggcaaggattgttacgcctacaccatcacttgcatcc
gacgcttctgtagcccgcctaacggaagtgttgactgcacactttggtaaacccattaag
ttgacgattgagaagggtgaagtcgaaggcaagagcgttgccaaaattgatgcagcgatt
catcaagagaaaagacaaactgcggaacaactgatcgcagccgatccttttattcaagca
cttgaaaaagagtttggcgctaaggtggttggcggctcagtaaaacccctataa
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