Polynucleobacter paneuropaeus: DPM16_03850
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Entry
DPM16_03850 CDS
T05507
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
poh
Polynucleobacter paneuropaeus
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
poh03016
]
DPM16_03850
Enzymes [BR:
poh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DPM16_03850
Transfer RNA biogenesis [BR:
poh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DPM16_03850
Prokaryotic type
DPM16_03850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AWW44441
LinkDB
All DBs
Position
747646..748479
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AA seq
277 aa
AA seq
DB search
MRIALGLQYEGSQFSGWQTQALPIRSVQAELEKAIESFIGSEGVANNPVRTITAGRTDTG
VHALGQVVHFDTSIERTDWSWVRGINAFLPPDIVINWAKPVSEEFSARFSAFERTYIYAV
HASSCRAPLLSNRAGFFMLPPDTWFDIPAMKKAAECLIGEHDFSSFRSAECQSKTPIKTM
YSIDIVSEQPWLYFRIRGNAFLHHMVRNLIGCFLMIGVGKQGPEWMQEVLVAKNRSLAAP
TFAPDGLYLAKIAYPEKFEIPDPWLQNSFLPSQLLQN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
gtgagaattgcactgggtttgcaatatgagggcagccagttttctggttggcaaactcaa
gccttgcctattcgatcggttcaagcagaattagaaaaagccattgagtcattcattggt
agtgagggcgttgccaataatccagtcagaacaatcactgcaggccgaactgacaccggc
gttcatgccctaggtcaagtagtgcactttgatacctctattgaacgcacggattggtct
tgggttaggggaatcaatgcatttttaccacccgatattgtgattaattgggctaaaccc
gtttcagaagaattcagtgcacgattttcagcctttgaaagaacgtatatctatgcagta
catgccagttcttgcagagcccctttactttcaaatcgggctggtttctttatgttgcct
ccagatacctggtttgatattcctgctatgaaaaaagcggcagagtgtttaattggagaa
catgatttcagctcctttcggtctgctgaatgccaaagtaaaacaccaatcaaaacgatg
tattcgatcgatatcgtttcagagcaaccttggctatatttccggatccgaggcaatgcc
tttttgcatcatatggtgcgcaatttgatcggctgcttcttaatgattggtgtcggcaag
caagggcctgagtggatgcaagaagtcctggtagccaagaatcgcagtttggcggcaccg
accttcgcccccgatgggctttatttggccaaaattgcttatccagagaaattcgagatc
ccagacccatggctgcaaaattcttttcttcctagccaactcctccagaattaa
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