Polynucleobacter paneuropaeus: DPM16_04425
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Entry
DPM16_04425 CDS
T05507
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
poh
Polynucleobacter paneuropaeus
Pathway
poh00061
Fatty acid biosynthesis
poh00071
Fatty acid degradation
poh01100
Metabolic pathways
poh01212
Fatty acid metabolism
poh02024
Quorum sensing
poh04146
Peroxisome
Module
poh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DPM16_04425
00071 Fatty acid degradation
DPM16_04425
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DPM16_04425
09145 Cellular community - prokaryotes
02024 Quorum sensing
DPM16_04425
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
poh01004
]
DPM16_04425
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
poh04147
]
DPM16_04425
Enzymes [BR:
poh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DPM16_04425
Lipid biosynthesis proteins [BR:
poh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DPM16_04425
Exosome [BR:
poh04147
]
Exosomal proteins
Exosomal proteins of breast milk
DPM16_04425
Exosomal proteins of breast cancer cells
DPM16_04425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AWW44537
LinkDB
All DBs
Position
complement(858855..860540)
Genome browser
AA seq
561 aa
AA seq
DB search
MNTAKPWLKNYPAGVPARLILPAQASLVDLLDESFARYPKRKAIESMGHSFSYEELNVLS
EQFASYLQSLDLPMGSRVAIMFPNVTQYLIAMLGALRAGLVVVNVNPLYTSRELEHQLND
SQALVLVLSENFAHIYQQIAEKTSVKRVIVSSLGDLLGPKGLLVNFAARYIKKIIPQWAF
PHTRFTDALQLGKQHLFQKPTIDPNAIAFLQYTGGTTGVSKGAILLHRNVLANVLQTDAW
LEPVLRDQHDQQLVFLCALPMTHIFALTACALLGLRKGGLLLLVANPRDITGLIKLLAKH
PEVNIFPGVNTLFHALVHRPEFSKLKLSNLLVTIGGGMAMQKKTADHWQAITGNPIAQGY
GLSETSPVVCVNTPLIEKFTGHIGLPLPNTDVVILGEDGKRMPMGEAGEICIQGPQVMAG
YWNQPEETRKAFTVDGYFKSGDIGFMDSEGYVTIVDRIKDMIVVGGFKVFPNEVEEVLAS
MPGIHECAVVGVEHRKLGEIVKAYIVKDKHDLTNADVLQFCKEQMTSYKRPRKIVFVSEL
PKSNVGKILRREVRKLGDSSS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaatacggctaaaccttggctgaagaattatccagcaggggttcctgctcggcttatt
ctcccagcacaggcttctttagtggacttactagatgaatcctttgcgcgatatccaaag
cgcaaggcgatcgagtctatgggccattcttttagctatgaagagttaaacgtactctct
gagcaatttgcatcttatttgcaatcgcttgacctaccaatgggttcgcgagtagcgatt
atgtttcctaacgtaacgcaatatctcattgcgatgctgggagcattgagagcaggctta
gtggtagttaatgtcaatccactgtatacatcgagagaattagaacatcaactgaatgat
agccaagcactggtgctcgtactctctgaaaactttgcccatatctatcaacagatagca
gaaaaaacttccgtaaagcgagtgatcgttagcagtttaggagacttattgggtcccaaa
ggcctgcttgttaattttgccgcgcgttacattaagaagatcattcctcagtgggctttc
ccacatacgcgttttacagatgccctccaacttgggaaacaacatctctttcaaaagccc
acgattgatccgaatgcgattgcctttttgcaatataccgggggcactactggcgtatct
aaaggagctattttattgcatcgaaatgtacttgcaaatgtacttcaaactgatgcgtgg
cttgagccagtactcagggatcaacatgatcagcaattggtgtttttatgtgcattacca
atgacccatatctttgccttgacagcctgcgctctattgggattacgcaagggtgggtta
ttgcttctggttgccaatccaagagacatcacagggctcattaaattgcttgcaaagcac
cctgaagtcaatatctttcctggcgttaacacgctctttcatgctctggtccaccgtcct
gagttcagcaaactgaaactatcgaacttactcgtgactattggtggtgggatggcgatg
caaaagaaaacagccgatcattggcaggccatcaccggcaacccaattgcgcagggctac
ggcttatcggaaacttcaccggttgtgtgcgtcaatacaccattaatagagaagttcacc
ggtcatattggtttgccattgcccaataccgatgtagtgattttgggtgaggatggcaag
cgaatgccaatgggtgaggcaggagaaatttgcattcagggcccccaggtcatggcgggt
tactggaatcagccagaagaaacccgcaaagcatttactgttgacggttacttcaagtct
ggcgacattggctttatggatagcgaaggttatgtaacgattgttgatcgcattaaagac
atgattgtggttggcggctttaaggtcttcccaaatgaagtagaagaggttctcgcttca
atgccgggtattcatgaatgtgcagtagtgggtgttgaacaccgtaagcttggtgagatt
gttaaagcttatatcgtgaaagataaacacgatctgacaaatgcagatgttctgcaattt
tgcaaagaacagatgacgagctataagcgcccccgaaaaattgtctttgttagtgagctg
cctaagtctaatgtggggaagatcttgcgccgtgaagtcagaaaactcggagattcaagt
tcttag
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