Polynucleobacter paneuropaeus: DPM16_04615
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Entry
DPM16_04615 CDS
T05507
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
poh
Polynucleobacter paneuropaeus
Pathway
poh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DPM16_04615
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
poh01007
]
DPM16_04615
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
poh03016
]
DPM16_04615
Enzymes [BR:
poh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
DPM16_04615
Amino acid related enzymes [BR:
poh01007
]
Aminoacyl-tRNA synthetase
Class II (U)
DPM16_04615
Transfer RNA biogenesis [BR:
poh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DPM16_04615
Prokaryotic type
DPM16_04615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
AWW44571
LinkDB
All DBs
Position
complement(895280..897733)
Genome browser
AA seq
817 aa
AA seq
DB search
MQFSESWLRQYVNPELDSVALGHAMTMAGLELEEQHSVAPAFTQIVVAQILSAEQHPDAD
RLRVCKVNAGTGQELQIVCGAPNARPGIKIPCALVGAQLPPSEVGGKPFQIKVGKLRGVE
SQGMLCSGKELGLGDDHEGILELPADAPVGKDIRQYLDLDDQIFVIKLTPNKADCLSLVG
MAREVAAITGAVLKKPEWKAVPASIKDQRKVIVENTELCGRFAGRVIQGVNAKAKTPDWI
VQRLARAGQRSISALVDLSNYVMLEVGQPSHVFDLDKVTGDIIVRWAKTGEQLELLNGQT
VQLVEQNNPKALSIGVVADQNGPLALAGIMGGNHCAVSDDTRNIFVEAAYWQPNAIQGRA
RRFNFSTDAAHRFERGVDPQATVDCLEYLSALIIQVCGGQAGPINDQVLAMPERKSVKMR
LDRASKVIGIPLTTQIVSGVFQGLNFDFKLESDTFIVTPPSYRFDIEIEEDLIEEVARMY
GFENIPDHPPVASLKMSAKPEAKRAVHLLRQRFALQGYQEAVNFGFIDAESEKRLVGAGD
ATLIKVLNPIASQYGVMRSNLWGGLLNNLKANLNRGATRVRLFETGRVFKRDAGVTVQPG
KVAGFNQPQRIGGLAYGSFVPEQWANANRFVDFFDVKGDLERVFDPLHLVTETAQHPALH
PGRSAQVMMKSPEGPVILGWIGELHPGLQQAYELPQAPILFELDLELLRNVGLPQPEELS
KFPAVQRDLAVVVKQNIAAQVLLDAMYASKPHFVRSIELFDEFRPKAGSASMAEDEKSLA
FRVTLLNPEDTLQDAQIEGVMSGLLAAIEKKCAARLR
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttctgaatcctggctaagacaatacgtcaatcctgagcttgatagcgtagcc
ctaggtcatgctatgacgatggcgggcttggagcttgaagagcagcactcagttgcccca
gcctttacccagattgtggttgcacagattctgtctgctgagcaacatcctgatgcggat
cgtttaagagtctgtaaagtgaacgctggtactggccaagaattacaaatcgtatgcggc
gcacctaatgctcgcccaggaatcaaaattccttgtgctttggttggtgctcaattgcca
ccttctgaagtcgggggaaagccatttcaaatcaaagtgggtaagttgcgcggtgtcgaa
agccaaggtatgttgtgctctggtaaagagctcggcttgggtgatgatcatgaaggtatt
ttggagttgccagctgatgctcctgtaggcaaagatattcgtcaatatttggatttagat
gatcagatttttgtcatcaagctcacgcctaataaagcggattgtttgtctttggttggt
atggcaagagaagttgcggcgattaccggagcggtactcaaaaagcctgagtggaaggcc
gtaccggcttccattaaagaccaacgcaaagtcatcgttgagaacacagaactttgtggc
cgctttgctggtcgtgtgattcagggcgtgaatgcaaaagccaaaacacctgattggatt
gtgcaacgtcttgccagagcaggtcaaagaagtatttctgccttagtggatctatccaat
tacgtcatgctcgaggtgggtcaacctagtcatgtatttgatttagataaagtcaccggc
gacatcattgtgcgttgggcgaaaacgggtgagcaattagagctcctcaatggtcagact
gttcagctggtagaacaaaataaccccaaggcactctctattggcgtagtagccgatcaa
aatggcccattagctctagctggaatcatgggcggcaatcattgtgccgtgagtgacgac
actaggaatatctttgtagaagcggcttactggcagcccaacgctattcaggggcgtgcc
cgtcgctttaactttagtaccgacgctgcccatcgctttgagcgtggcgttgatccccag
gcgacagtcgattgccttgagtatttatctgctttgattatccaagtgtgcggcggacaa
gccggccccattaatgatcaagttctggccatgcccgagcgtaagagcgtcaagatgcgc
ctagatagagccagcaaagtgatcggtataccattaacaacccaaattgtgagtggtgta
tttcaaggtctaaactttgactttaagctcgagagcgatacctttattgttacgccgcca
agctatcgctttgatatcgagatcgaagaagacttgatcgaagaggtagcacgcatgtat
ggttttgagaacatcccagaccatccaccagtagctagcttaaaaatgagtgctaagcct
gaagcaaagcgggcagtgcatttattacgtcagcgctttgctctgcagggctatcaagag
gcggtgaattttggctttattgatgctgaaagtgaaaaacgcttagttggtgcaggtgat
gccactctcattaaagtactcaatcccattgcaagccaatacggagtcatgcgcagtaat
ttatggggtggtttactcaataacctcaaagccaatctcaaccgaggtgcaacccgagtt
cgcctgtttgaaacgggtagggtatttaagcgagatgcgggtgttactgtgcagcctggc
aaagttgctggttttaatcagccacagcgcatcggcggtttggcttatggcagttttgtt
cctgagcagtgggccaatgccaatcgctttgtggatttctttgatgtgaagggtgatctt
gagcgggtatttgacccacttcatctggtaactgagactgcgcagcaccccgccttacat
ccagggcgctctgcacaagtcatgatgaaatcacctgagggccctgtgattctgggctgg
atcggcgaattacatccaggtttacaacaggcttatgagttgccgcaagcgccgatctta
tttgagctcgatttggagctcttgcgtaatgtcggtctgccacagccagaagaactgagc
aaattccctgcggtacaacgtgatcttgcggtggtagtaaaacaaaacatcgcggcgcaa
gtgttgcttgatgcaatgtatgcaagcaaaccccattttgtccgctccattgaattattt
gatgagttccgtcccaaagcaggatctgcatcgatggcagaagatgaaaagagtttggca
ttccgtgtcacattgttaaatcctgaggacacattgcaggatgcacaaattgagggcgta
atgagtggcttattagctgccatagaaaaaaaatgtgccgcgcgcttgcgctag
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