Polynucleobacter paneuropaeus: DPM16_06585
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Entry
DPM16_06585 CDS
T05507
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
poh
Polynucleobacter paneuropaeus
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
poh03009
]
DPM16_06585
Enzymes [BR:
poh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
DPM16_06585
Ribosome biogenesis [BR:
poh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DPM16_06585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
RsmF-B_ferredox
Ubie_methyltran
MTS
Methyltr_RsmF_N
Methyltransf_25
Methyltransf_24
Methyltransf_37
Cons_hypoth95
Methyltransf_15
Fibrillarin
GCD14
Motif
Other DBs
NCBI-ProteinID:
AWW44916
LinkDB
All DBs
Position
complement(1297864..1299396)
Genome browser
AA seq
510 aa
AA seq
DB search
MSKERSSRGSGPRSSNTKSYAAKNRDTSKRPERRNASGNLIAPVGQKNFSNAKALPQHAI
HLERLLPELLSFEQPADRVVSRYFRAEPQLGNRDRALIAESAFAILRRKNEFAQFAESGA
GSQARRLALLGLVSALSEGGLGSANRAESAIADLAHVLQPGEYEWLQRFSTVDPQALNPL
VRNNLPEWLWDAFGAYPGEDTREDLAKALMHPALLDLRANTMKINREQLLADMNALGGRY
QAIPTPYAPDGVRIMGKPALQNTVAFKAGAFEVQDEGSQLLAYLLAPKRGEMVVDFCAGA
GGKTLAIGALMRSTGRLYAFDTSERRLANLKPRQARSGLSNVHPVWIDSENDAKIKRLAG
KIDRVLVDAPCSGMGTLRRNPDLKWRQTPQGVLELNQKQANILHSASRLLKPGGRLVYAT
CSLLPQENQQIAEDFLANHPDFEIIPAAEALKPLFPKDILPIGCSKDNPWWQLWPHIHGT
DGFFGAIFQRKASTTPLKEVSKKPKEEPDQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaacgttcatcgcgtgggtctggcccacgtagtagtaataccaaaagctac
gcagctaaaaaccgagacacttcaaaacgtccagagcgacgcaatgccagtggtaactta
attgcgcctgtaggtcaaaagaatttttcgaatgcaaaagccctacctcaacacgcaatt
cacttagaacgtttattgccagagctcttaagctttgagcagccagctgatcgtgtagtg
agtcgttattttcgtgcagagccacagctaggcaatcgagatcgtgctttgattgcagag
agtgcctttgctattctgcgaagaaaaaatgagtttgctcaatttgctgaaagtggcgct
ggttcacaagctagacgtctagccctcttgggcttggtatccgctctttctgaaggcggc
ttaggctctgctaatcgtgctgaaagtgccattgcagatcttgcgcatgtgctgcagcct
ggtgagtatgagtggttgcaacgtttctcgacagtcgacccgcaagccttaaatccattg
gtccgcaacaacttacctgaatggttgtgggacgcttttggagcatatcccggagaagat
acgcgcgaagatttagcaaaggctttgatgcatccagcgttactagatttaagagcaaac
accatgaaaatcaatcgcgagcaattgcttgcggatatgaatgcactgggtggtcgctat
caagcgattcccactccctatgctccggatggggtgcgcatcatgggtaagcctgcccta
caaaatacagtcgcttttaaggcgggcgcctttgaagtgcaagacgaaggcagtcaattg
ttggcttatttgcttgctccgaaacgcggtgagatggtagtcgacttttgcgctggcgca
ggtggtaaaactttagccattggagcgctcatgcgctcgacaggacgcttgtatgctttt
gacacctcagagcgtcgacttgcaaatttaaagcctcgacaagcccgcagcggcctttct
aatgtgcatccggtgtggattgatagtgagaacgatgccaagatcaaacgcttggctgga
aagattgatcgtgtgctcgtagatgccccttgcagtggcatgggaactttacgccgcaac
ccagatctgaaatggcgccaaactccacagggagttttagagctcaatcaaaagcaggcc
aacattctgcattccgctagccgcttgcttaaaccgggcggtcgcttggtatatgccacc
tgcagccttttgccccaagaaaaccaacagattgccgaagattttctggcgaatcatcct
gattttgaaattattcctgctgcagaagctcttaagccattgttccctaaagatatttta
cctattggttgcagcaaagataacccttggtggcagctatggcctcacattcacgggact
gatggcttctttggagctattttccaaagaaaagccagcactacgcctctaaaagaggtc
tccaagaagccaaaagaagagcctgatcaataa
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