Polynucleobacter paneuropaeus: DPM16_07445
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Entry
DPM16_07445 CDS
T05507
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
poh
Polynucleobacter paneuropaeus
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poh03021
]
DPM16_07445 (rpoH)
Transcription machinery [BR:
poh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DPM16_07445 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma54_CBD
Motif
Other DBs
NCBI-ProteinID:
AWW45067
LinkDB
All DBs
Position
1478284..1479225
Genome browser
AA seq
313 aa
AA seq
DB search
MVEKKAYKPVARAVSAVLPASQSGGAMAFPTMPSLGVGTLDAYIAYVNRVPMLSAAEELH
LAQEFRRTENVDAARTLVLSHLRLVVSVARQYLGYGIPHADLIQEGNVGLMKAVKRYDPS
QGARLVSYAIHWIKAEIHEYILKNWRLVKVATTKAQRKLFFNLRSNKPTLATLRPSEVDA
LAKALDVSGEDVREMEMRLAGGDITLEGDDSDEDAAYAPIQWLSDSNQEPTAMLAAVDAD
HLQGPQLDQALMSLDERSRNIVQSRWLAMDADGHGTKTLHDLAAEYGISAERVRQIETSA
LKKMRALLQAQAV
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaaagaaagcctataagccagttgctcgcgctgtgtctgccgtattgccggca
tcacagtctgggggcgccatggcctttcctacgatgccttcccttggtgttggcacttta
gatgcttatattgcctacgttaatcgcgtgccgatgttaagcgctgcggaagaattgcat
cttgcgcaagagtttcgtcgtactgaaaatgtggatgcagcgagaaccttggtgctctca
catttacgcttagttgtatcggttgctcgccaatacttaggctatggcattccacatgct
gacctcatccaagaaggtaatgtgggtctcatgaaagcggtcaaacgctacgaccctagc
caaggtgcacgtttagtgtcttatgcaattcattggattaaagctgagattcatgagtac
attctcaagaattggcgcttagttaaagtagcaacaactaaagcgcaacgcaaattgttc
tttaacttgcgcagcaataaaccgacactagcgacgctcagaccgagtgaagttgacgct
ctagcaaaagcactagatgtaagtggtgaagatgttagggaaatggaaatgcgactcgcc
ggtggtgatatcacccttgagggcgatgatagcgatgaagacgctgcttatgcgcctatt
cagtggctgtccgattcaaaccaagaacccaccgccatgctggctgcggtggatgctgat
catcttcagggtccgcaattagatcaagcgttgatgtccttagatgagcgtagtcggaat
attgtgcaatctcgttggttggcaatggatgctgatggccatggtactaaaacgctacat
gaccttgcggcagagtatggaatttctgctgagcgcgtgagacagattgaaacgtctgct
ctcaaaaagatgcgtgccctacttcaagcacaagccgtttaa
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