Polynucleobacter paneuropaeus: DPM16_07845
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Entry
DPM16_07845 CDS
T05507
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
poh
Polynucleobacter paneuropaeus
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
poh03000
]
DPM16_07845
03036 Chromosome and associated proteins [BR:
poh03036
]
DPM16_07845
Transcription factors [BR:
poh03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
DPM16_07845
Chromosome and associated proteins [BR:
poh03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
DPM16_07845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
fvmX1
HTH_11
TetR_C_38
DUF6869
TetR_C_15
HTH_20
TetR
Rrf2
GCP6_N
HTH_Tnp_1_2
Tfb2_C
Motif
Other DBs
NCBI-ProteinID:
AWW45138
UniProt:
A0AAE2YKW3
LinkDB
All DBs
Position
complement(1549282..1549920)
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AA seq
212 aa
AA seq
DB search
MPDSLNSASNMDADKTRKRPRPGERRLQILQVLAEMLQNPKGERVTTAALAARIQVSEAA
LYRHFASKAQMFEGLIAFIEQTVFGLINQINQKEESGLAQARGILQMLLFFAEKNPGMTR
VLLGDALLQEDDRLQERITQVLDRVEASLKQALRIAQTQGGAWAQVSQEEVSIRAAMLMS
FVLGRWHRFARSGFKKLPTDASDISLRILLSE
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgccagattctttgaattcagcgagcaatatggatgctgataagacgcgcaaacgtccg
cgtcctggcgagcgccgcttacaaattttgcaagtccttgctgagatgttacaaaaccct
aagggtgagcgcgtaaccactgcagccctagcggcgaggattcaagtctcagaggctgcg
ctttatcgtcattttgctagcaaagcacaaatgttcgaaggcttgatcgcttttattgag
caaaccgtttttggattaattaatcaaatcaatcaaaaagaagaatctgggcttgctcaa
gcccgcggtattttgcaaatgctcttgttcttcgctgaaaaaaatcctggcatgaccaga
gttctactcggtgatgctttattgcaagaggatgatcgtttgcaagaacgtatcactcaa
gtgctagatcgagtagaggcctctctgaagcaggccttgcgcattgcccagactcagggt
ggagcgtgggctcaggttagtcaggaagaggtgagtattcgagcagcaatgctgatgagc
tttgttttggggcgttggcatcgatttgcacgtagtggtttcaaaaaactaccaactgat
gcgtctgatattagtctgcgcattcttctgtccgaatga
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