Polynucleobacter paneuropaeus: DPM16_08115
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Entry
DPM16_08115 CDS
T05507
Name
(GenBank) 30s ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
poh
Polynucleobacter paneuropaeus
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
poh03009
]
DPM16_08115
Ribosome biogenesis [BR:
poh03009
]
Prokaryotic type
ribosomal protein modification factors
DPM16_08115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AWW45184
LinkDB
All DBs
Position
1595139..1596848
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AA seq
569 aa
AA seq
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MTTQSFIPGKDASLESTIATMQKKLADRGFFLNESSLLNPVEGIWSTHVKDQDCPMLFAN
GKGATELAARASAFGEFFERLGTHYFWTHFYLGKKRASGKFVHYPQEKWFPHGDGSWPSE
LLNPELHSFYNPDGAIDSSVLVDLNSGNIERGICALPYTRLRDGELTWIPVNIIGNLYVS
NGMSAGNTMMEARTQALSEIYERHIKYRIISEGLCLPDVPEEVIARYPKIANGIKGLRDA
GFGILVKDASLGGEYPVMNVTLLHPKDQGCFASFGAHPRFEIALERALTELLQGRALDSL
ENFAAPGFDMDEINSVSNLEIHFVDSSGVISWSFLSNQPDFPFIGWNFSSTTEEDYNWLC
KRIEKDGCDAYVADFPEQGAYACRILVPGMSEIYPVEDLEWENNSVGNLIRPALLRLSQL
SNSEIKDLLTELQTLNLNDERPLWEILGLAIPVATSWKELRIGELKTLLALAVGDKEAVL
EGCDWIDHYKQMNPARRLVYRCIENYLQFDSPTAYEHSLSLLYGTEILRQAKALINRDER
FFGLEDLGENMEASAMHQSLLAAYDKLFT
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgactacacaaagctttatacccggcaaggatgcatcgcttgaatcgacgatcgccact
atgcagaaaaagttggcggatcgagggttctttctcaacgaatcttctcttctgaatcct
gtggagggcatttggtctacacacgtgaaggaccaagattgccctatgttgtttgctaat
ggtaaaggcgcaacagaattagccgctcgcgctagtgcgtttggtgagttctttgaaaga
ctcggtacacattacttttggacccacttttatctaggcaagaaaagggcttcaggcaag
ttcgtgcactacccgcaagaaaaatggtttcctcatggtgatggctcatggccaagcgaa
ttactcaatcctgaattgcattctttttacaaccctgatggcgcaattgatagctctgtc
ttggttgatctcaattctggaaatatagagcgaggaatttgtgcgctaccctacacccgt
cttcgcgacggagagctcacttggatacccgtgaatattattgggaatttgtatgtcagc
aacggcatgtctgctggcaacaccatgatggaagcccgcacacaagccctttctgaaatt
tatgagcgacacattaaatatcgaatcattagcgagggactttgtctgccagacgtacct
gaagaggtaattgcacgctatcctaaaattgcaaacggcataaaaggtttgcgtgatgct
ggctttggaatattggttaaggatgcctcgcttggtggtgagtatcccgtcatgaacgtg
accctattgcatccaaaagatcagggctgctttgctagctttggtgcccatcctcgtttt
gagattgcgctcgaacgcgctctgactgaactactacaaggtcgcgccttagattcttta
gagaactttgctgcgcctggttttgatatggatgagattaactcggtatctaatctcgaa
attcatttcgtagattctagtggcgtgattagctggagctttctaagcaatcagcctgac
tttccttttataggctggaactttagttcgactacggaagaagattacaactggttatgc
aagcgtattgaaaaagatggctgcgatgcttatgttgcagactttcctgagcaaggcgct
tacgcatgccgaatactagtgccaggcatgtcagaaatttatccggtggaagacttggag
tgggagaacaatagcgttgggaatctcattcgtccagcactattgcgcctgtctcaactc
agtaattcagaaataaaagatttgctaaccgaattgcaaacactcaatttaaatgatgag
cggccgctctgggaaattctgggcttagctattccggttgctacaagctggaaagagttg
cgtatcggcgaactaaaaaccttgcttgctctagcggtaggtgataaagaagcggtcctt
gaaggctgcgattggattgatcactacaagcaaatgaatcctgcgcgcagactagtctat
cggtgcattgaaaattatcttcagtttgatagccctactgcctatgagcattctctatct
cttctgtatggtacagaaatattgcgccaagctaaagctcttattaatagagatgagcgc
ttctttggtcttgaggatcttggtgaaaatatggaggccagcgcaatgcatcaaagcctt
ctagctgcatacgacaaactatttacgtaa
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integrated database retrieval system
