Polynucleobacter paneuropaeus: DPM16_08160
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Entry
DPM16_08160 CDS
T05507
Name
(GenBank) FAD-dependent oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
poh
Polynucleobacter paneuropaeus
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
poh03016
]
DPM16_08160
Enzymes [BR:
poh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
DPM16_08160
Transfer RNA biogenesis [BR:
poh03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DPM16_08160
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAO
Pyr_redox_2
NAD_binding_8
NAD_binding_9
MurD-like_N
3HCDH_N
Lycopene_cycl
FAD_binding_3
HI0933_like
FAD_binding_2
TrkA_N
NAD_Gly3P_dh_N
NAD_binding_7
AlaDh_PNT_C
Pyr_redox
HcgC
F420_oxidored
NAD_binding_2
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AWW45193
LinkDB
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Position
complement(1606712..1607938)
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AA seq
408 aa
AA seq
DB search
MIKPQHHAVVVIGAGIAGAAIANALLEQGQAVCVVDAASGPATACSSHAHAIAHPHIGRG
SPRLLRLTRIAFLLAEAQWGASWNQHGIFQPSKKDKSFDRVEVAAYLQALELDESIAIAL
EAKDAEQICGIKQNGVWLPRGASMSLSGASKKLLEAQSGLSTCWDQEITKLEQSNGHWLL
LNKENHAVLCADKVVIAAGAHTKSLIDSLKVRLPLRPVRGQLSIFSVAENSSWAQELPSV
GISGDGYCLPAQVLDDGRCTWMVGSSYDEGEDDLLPRQSSDQFNREQARSLLNFAQGNLA
DLQSHGSFVGIRCVAGDRLPIIGPLSQRPGIFIASAFGSRGVLWSALSAKLITAQVLDDA
ALLARLGLTADLLAALDPARFLAGAAPSALGALASNSKPIFPSGPRAK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtgattaaaccccaacaccatgccgttgtggtgattggggcaggcattgcgggtgctgcc
attgccaatgccttgcttgagcagggacaagctgtttgtgtggtcgatgcagcatcaggc
ccagccactgcatgttcaagtcatgcccatgcaattgcccacccccatattggcagaggt
tcaccgcgcttacttcgcctaacccgtattgctttcttactagcagaagcccagtggggg
gcaagctggaatcaacacggtattttccagccaagcaagaaagacaaatcatttgatcga
gtagaggtggctgcatatttgcaagcacttgaacttgatgaaagcatagcaattgcccta
gaagcaaaagacgcagaacagatttgcggcattaaacaaaatggagtttggttaccgcgt
ggcgcatcgatgagtctttcaggcgccagtaaaaagctgctagaagcacaaagtgggcta
agcacttgttgggatcaagaaattacaaaactagagcaaagcaatggccattggctgctg
ctgaataaggagaatcacgcagtactctgcgccgataaagttgtaatcgccgccggtgca
catacaaaatctttaattgacagtctgaaggtgcgcctaccgttaagaccggtgcgtgga
cagctgagtattttctctgtggcagaaaatagttcttgggctcaagaacttccttcggta
ggtatatctggtgatggctactgcttgcctgcacaagtgcttgacgatggtcggtgcact
tggatggtcggctcaagctatgacgagggcgaagacgacctacttccaaggcaaagcagc
gatcaatttaaccgtgagcaagcaagatccctcttgaactttgcccagggtaatttggct
gatcttcaaagccacggtagctttgtagggatacgttgcgttgcgggggaccgactaccg
attattgggcccttaagtcaacgccccggaatatttatagctagcgcttttggatctagg
ggcgtgctttggtcagccttgtcagcaaaactcattactgctcaggtgctagacgacgca
gctttactagcccgcttaggcttgactgctgatttgcttgcagcgcttgacccggcacgt
tttttagcgggcgccgccccttcagctttaggcgccttagcttcaaactcaaaaccaatt
tttccatcaggcccgagagccaagtag
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