Pseudomonas orientalis: BOP93_03540
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Entry
BOP93_03540 CDS
T05323
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
poi
Pseudomonas orientalis
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poi03400
]
BOP93_03540
Enzymes [BR:
poi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BOP93_03540
DNA repair and recombination proteins [BR:
poi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BOP93_03540
Prokaryotic type
BOP93_03540
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Fer2_4
Motif
Other DBs
NCBI-ProteinID:
AUZ44687
UniProt:
A0A2L0RRC6
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All DBs
Position
complement(843028..844470)
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AA seq
480 aa
AA seq
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MHLIWLRTDLRLHDNTALTAASQRGPVAAIYLITPQQWLAHDDAPCKVDFWLRNLHALKQ
ALADVNIPLLIRHADTWDQAPGVLSQLCRELKVESVHVNEEYGIHESRRDSAVARALEAD
GVTFHSYLDQLFFQPGSVLTKSGTYFQVFSQFRKVCYTRLHSALPPLVASPKAQAVLDLQ
SDAIPTRVEGFEPPSETLRALWPAGEDEARRRLDAFADEQISYYKDERDFPAKPGTSQLS
AYLAAGVVSPRQCLHAALQSNQGEFESGDIGTITWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRDAPEDLAAWQQARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDSEGLFIT
HWLPELAALNKKEVHNPEASGGLFGVADYPRAIVDLKKSRERALAAFRSLPSRQEMAEHE
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgatctggctgcgcaccgacctgcgccttcacgacaacaccgccctgactgcc
gccagccagcgaggcccggtcgcggccatttacctgatcacgccgcaacaatggctggcc
cacgatgatgcgccgtgcaaggtcgatttctggctgcgcaacctgcacgccttaaagcaa
gcgctcgcagacgtgaacatcccgctgctgatccgccacgccgacacctgggaccaggcg
ccaggcgtgttgagccagctatgccgggagctcaaggtcgagtcggtgcatgtcaacgag
gaatacgggatccacgagagccgtcgcgacagcgccgtggcccgggcgctggaagcagac
ggcgtgaccttccacagctacctcgaccagctgttcttccagccgggcagtgtgttgacc
aaatccggcacctactttcaagtgttcagccagttccgcaaggtctgctacacccgtctg
cacagcgccttgccgcctttggtggcaagccccaaggcccaggccgtgctcgacctgcaa
agcgatgccatccccacccgcgttgaaggtttcgagccgcccagcgaaaccttgcgcgcg
ctctggcccgccggtgaagacgaggcgcgccggcgcctcgacgccttcgccgatgagcag
atcagttactacaaggacgagcgcgactttcccgccaagcccggcaccagccagctgtcc
gcctaccttgccgccggggtcgtgtcgccgcgccagtgcctgcacgccgcgttgcagtcc
aaccaaggcgagttcgaaagcggtgacatcggcacgatcacctggatcaacgaactgctg
tggcgcgaattctacaaacacatcctcgtgggctacccgcgcgtttcccgccaccgtgcg
ttccgccccgaaaccgaggcggtggcctggcgcgacgcccccgaggacctggccgcctgg
caacaggcacgcaccggcttgccgatcatcgatgcggccatgcgccaactgctggaaacc
ggctggatgcacaaccgtctgcgcatggtggtggcgatgttcctgaccaagaacctgctg
atcgactggcgcgagggcgagcgcttcttcatgcggcacttgatcgacggtgacctggcg
gccaacaacggcggctggcagtggagttcctcgacgggcaccgactcggcgccgtatttc
cggattttcagcccgctgagccagtcggaaaaattcgacagcgaagggttgttcatcacg
cactggctgccggaactggccgcgctgaataaaaaagaagtacacaaccccgaagcctct
ggcgggctgttcggcgtggccgactacccgcgcgccattgtcgacctgaagaaatcccgc
gaacgtgccctcgccgcctttcgcagcctgccttcgcgtcaggagatggccgaacatgag
tga
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