Pseudomonas orientalis: BOP93_04155
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Entry
BOP93_04155 CDS
T05323
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
poi
Pseudomonas orientalis
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
poi03019
]
BOP93_04155
03009 Ribosome biogenesis [BR:
poi03009
]
BOP93_04155
Messenger RNA biogenesis [BR:
poi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BOP93_04155
Ribosome biogenesis [BR:
poi03009
]
Prokaryotic type
rRNA processing factors
BOP93_04155
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
AUZ44799
UniProt:
A0A2L0RS05
LinkDB
All DBs
Position
971260..972717
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AA seq
485 aa
AA seq
DB search
MSEEILINITPMESRVAVVENGVLQEVHVERTQKRGIVGNIYKGKVVRVLPGMQAAFVDI
GLDRAAFIHASEISLREGPAVESISALVHEGQSLVVQVTKDPIGSKGARLTTQLSIPSRY
LVYMPRTAHVGISLRIEDEAERERLKKVVSDCVAAEGIKEAGGFILRTAAEGAGADEILM
DIRYLRRLWDQIDAQIKTIGAPSVIYEDLGLALRTLRDLVSPKIEKIRIDSRETFQRTTQ
FVAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVVDPAEAMTTID
VNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDGEHQRQVLRTL
EKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCSSCQGRGKLKTPETVCYEI
FREILREARAYQAEGYRVLANQKVVDRLLDEESGNVAELEGFIGRTIRFQVETMYSQEQY
DVVLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagagattctgatcaatatcacgccgatggaatcgcgcgtggcggtggtagag
aacggtgttctgcaagaagtgcatgtggagcgtacccagaagcgcgggatcgtcggcaac
atctataaaggcaaggtagtgcgcgtattgccgggcatgcaggcagccttcgtcgacatc
ggcctggaccgcgccgcgtttatccatgcttcggaaatctccctgcgcgaaggcccagcg
gtggaaagcatcagcgccctggtgcacgaagggcagagcctggtggtgcaggtcaccaag
gaccccatcggttccaagggcgctcggctcacgactcaactgtcgattccttcgcggtac
ctggtgtacatgccgcgtacggcccatgtgggcatttccctcaggatcgaagatgaagcc
gagcgcgagcgcctgaaaaaggtagtcagcgactgcgtggccgccgagggcatcaaggag
gccggtggttttatcctgcgcaccgctgccgaaggggcgggtgccgatgaaattctgatg
gacatccgttacctgcgacgcctgtgggatcagatcgatgcacagatcaagaccatcggc
gcgccaagcgtcatttatgaagaccttggcctggcgttgcgtaccttgcgcgatctggtc
agcccaaagattgaaaaaatccgcatcgactcgcgggaaaccttccagcgcaccacgcaa
ttcgttgcagagctgatgccggaaattgccgaccgcctggagcactatccgggcgagcgg
ccgatcttcgacctgtacggcgtcgaagacgaaatccaaaaagcgctggagcgcaaggtt
ccgctcaaatccggtggctacctggtggtggacccggcggaagccatgaccaccatcgac
gtcaacaccggcgcgttcgtgggccaccgcaacctcgaagaaaccatcttcaagaccaac
ctcgaagcggctaccgcgattgcgcgtcaactgcgcctgcgcaatctgggcggcatcatc
atcatcgacttcatcgacatggaggatggcgagcaccaacgccaggtcctgcgcacccta
gaaaagcagctggagcgcgaccacgccaaaaccaacatcattggcatcaccgagctgggc
ctggtgcagatgacccgcaaacgcacccgcgaaagccttgagcaggtgctgtgcgagccc
tgcagcagttgccagggccgcggtaaattgaagaccccggaaacggtttgctacgagatt
ttccgcgaaatcctacgggaggcacgcgcctaccaggctgaaggttatagagtgctcgcc
aaccagaaagtggtggatcgcctgctggatgaagagtcgggtaacgtcgcagaactggag
ggctttatcggacgcaccattcgttttcaggttgaaaccatgtactcccaggaacaatac
gacgtggtgctgctctga
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