Pseudomonas orientalis: BOP93_04780
Help
Entry
BOP93_04780 CDS
T05323
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
poi
Pseudomonas orientalis
Pathway
poi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BOP93_04780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
poi03019
]
BOP93_04780
Enzymes [BR:
poi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BOP93_04780
Messenger RNA biogenesis [BR:
poi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BOP93_04780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AUZ44922
UniProt:
A0A2L0RSE2
LinkDB
All DBs
Position
complement(1108041..1109501)
Genome browser
AA seq
486 aa
AA seq
DB search
MTVLKALKKMFGKSEAEPLAPVPSAPVPPTGSRNGGQQPARTAPVAQANVTAPEQPKPIE
VAAAPVAPKPRREHAPKRVVIPWKLEDFVVEPQEGKTRFHDFDLAPELMHAIQDLGFPYC
TPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAP
TRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLLDFNQR
GDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKAERQTLLFSATFTEDVMNLAKQ
WTTDPSIVEIEALNVASENVEQHIYAVAGADKYKLLYNLINDNGWERVMVFANRKDEVRR
IEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGISHVINF
TLPEVPDDYVHRIGRTGRAGAAGVSISFAGEDDSYQLPSIEALLGRKISCETPPTHLLRA
VERKRP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgctcaaagcactcaagaagatgttcggcaaaagcgaggctgagccgctcgcg
cctgttcccagtgctcccgtcccgccaaccggcagccgcaatggcggccagcagcccgcc
cggacggcacctgttgcccaggcgaacgtgacagcgccggaacaaccaaaaccgattgag
gtcgctgccgcgccggtcgcgccaaagcctcgccgcgagcacgccccaaagcgggtcgtc
atcccatggaaactcgaagacttcgtcgtcgagccccaggaaggcaagacccgcttccac
gacttcgacctggccccggaactgatgcacgccatccaggacctgggctttccgtactgc
acgccgatccaggcgcaggtgctgggcttcaccctggccggcaaagacgccattggccgc
gcccagaccggcaccggcaagaccgccgcgttcctgatctcgatcatcacccagctgctg
caaacgccgccgcccaaggaacgctacatgggcgaaccgcgcgcactgatcatcgcgcct
acccgggagctggtggtgcagatcgccaaggacgccgccgacctgaccaagtacaccggc
ctcaacgtcatgacgttcgtcggcggcatggacttcgacaagcagctcaagcacctcgag
gcgcgtcactgcgacatcctggtcgccaccccaggccgcctgctcgacttcaaccagcgt
ggcgacgtgcacctggacatggtcgaagtgatggtgctggacgaagccgaccgcatgctc
gacatgggctttatcccacaagtgcgccagatcattcgccagaccccaccaaaagccgag
cgccagaccctgctgttctccgcgaccttcaccgaagacgtgatgaacctcgccaagcag
tggaccaccgacccgtccatcgtcgagatcgaagcgctcaacgttgccagcgaaaacgtc
gagcagcacatctacgccgtggccggtgccgacaagtacaaattgctctacaacctgatc
aacgacaacggttgggaacgcgtgatggtcttcgccaaccgcaaggacgaagtgcgccgt
atcgaagaacgcctggtgcgcgatggcgtcaacgccgcgcaactgtccggcgacgtgccg
cagcataagcgcatcaagaccctggaaggtttccgcgaaggcaagatccgcgtgctggtg
gccactgacgtggccgggcgcgggattcacatcgacggcatcagccacgtgatcaacttc
accctgccggaagtgccggacgactatgtgcaccgcattggccgtaccggccgtgccggg
gcggcgggtgtgtcgatcagctttgccggcgaggatgactcgtaccagttgccatccatc
gaggcgttgctggggcgcaagatcagctgtgagacgccgccgacgcatttgttgcgggcg
gtggaacgcaaacgcccttaa
DBGET
integrated database retrieval system
