Pseudomonas orientalis: BOP93_06160
Help
Entry
BOP93_06160 CDS
T05323
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
poi
Pseudomonas orientalis
Pathway
poi03030
DNA replication
poi03430
Mismatch repair
poi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BOP93_06160
03430 Mismatch repair
BOP93_06160
03440 Homologous recombination
BOP93_06160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poi03032
]
BOP93_06160
03400 DNA repair and recombination proteins [BR:
poi03400
]
BOP93_06160
Enzymes [BR:
poi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BOP93_06160
DNA replication proteins [BR:
poi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BOP93_06160
DNA repair and recombination proteins [BR:
poi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BOP93_06160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AUZ45189
UniProt:
A0A2L0RT29
LinkDB
All DBs
Position
1429262..1432783
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAG
IKPICGADLWLSNKDPDNPLSRISLLAMNGVGYRNLTELISRGFIEGQRNGSIIIEREWV
AEASEGVIMLSAAKEGEIGIALLGGNPQEAEVLAREWMQVFPDRFYLEVQRTNRPNDEEH
LHAAVALADKLGAPLVATNDVRFIKKEDFEAHETRVCIGEGRALDDPRRSKNYSEEQYLK
SAEEMAELFSDLPEALENSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL
EDRLRVLLPKDTTEDYDAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWDMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVGEEPLDIAFIPLDDKPTYS
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEP
KAYQANIDRNRAVLLTAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYANHRKAKD
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
IKRVMSMEDARTNLAESLRLKVRTDALKGDQLRWLGDLLKRHRGACPVTMEYTGNDAKAM
LQFGETWRIDPADGLIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcatctacgcctgcacactgaatattccctggtcgacggcctg
gtgcggatcaagccgctggtcaaaaccctggtgggcatgaacatgcctgcggtggcggtt
accgaccagaacaacatgtgctccctggtcaagttctacaaaaacgccatgggcgcgggt
atcaagccgatctgcggcgccgacctgtggttgtccaacaaggacccggataaccccctg
agccgcatcagcctgctggcgatgaacggcgtgggttaccgcaacctgaccgaactgatt
tcccgtggctttatcgaggggcagcgcaatggctcgatcatcatcgagcgcgagtgggtg
gccgaagccagcgaaggcgtgatcatgctctcggccgccaaggagggcgagatcggtatc
gcgctgcttggcggcaacccgcaggaagccgaagtgctggcccgcgagtggatgcaggtc
tttcccgaccgcttttatctcgaagtgcagcgcaccaaccgtcccaacgatgaagagcat
ctgcacgccgccgtggccctggccgacaagctgggcgcgccgctggtggcgaccaacgat
gtgcgctttatcaagaaggaagatttcgaagcccacgaaacccgcgtgtgcatcggtgaa
ggccgcgccctggacgacccgcgccgttcgaagaactacagcgaagagcagtacctcaaa
agcgccgaggaaatggccgaactgttcagcgacctgcccgaggccttggaaaactcggtc
gaaatcgccaagcgctgcaatatcgaagtgaagctgggcaagcacttcctgcccaacttc
ccgattcccgatggcatgaccatcgacgagtactttcgcaaagtgtcgttcgacggcctt
gaggatcgcctgcgcgtcctgttgcccaaggacaccaccgaagactacgacgccaagcgc
caggtctacgtcgaccggctgaatttcgagctggatatcattatccagatggggttcccc
ggttacttcctgatcgtgatggactttatccagtgggccaagaacaacggtgtaccggta
ggtccgggccgggggtcaggtgcgggctcgttggtggcctacgtgcagaagatcaccgac
cttgacccattggaatatgatctgctgttcgaacgcttcctgaacccggaacgggtgtcc
atgcccgacttcgatgtcgacttctgcatggacggccgcgaccgcgtgatcgaatacgtg
gccgagaagtatggccgcaatgcggtgagccagatcatcaccttcggttccatggccgcc
aaggccgtaatccgcgacgtggcccgggtgcaaggcaagtcctacggcctggccgaccgc
ctgtcgaagatgatccctttcgaagtcggcatgactctggaaaaagcctacgagcaggaa
gaaatcctgcgcgacttcatcaaggttgatgaagaagccgctgaaatctgggacatggcg
cgcaagctcgaaggcgtggtgcgtaacgtcggtaagcacgccggcggcgtggtgatcgcg
ccgaccaagctgacggacttctcgccgatctactgcgatgaagaaggcgacggcctggtt
acccagttcgacaaggatgacgtggaggcggccggcctggtgaagttcgacttcctcggc
ctgcgcaccctgacgatcatcgactgggcgctcaagaccatcaaccgcgatcgcgccaag
gtgggcgaggagccgctggatatcgcgttcatcccgctggatgacaaaccgacctacagc
ctgctgcagaaagccgaaactacggcagtgttccagcttgaatcccggggcatgaaggag
ctgatcaaaaagctcaagcccgactgcctggaagacctgatcgcactggtggccctgttc
cgtccggggccgttgcagtccggcatggtggatgacttcatcaaccgtaagcacggccgc
gccgaactggcgtacccgcactccgactatcagtacgaaggcctcaagccggtactggcg
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagattgcccaggtcatggcg
ggctacaccctcggcggcgcggacatgttgcgtcgcgccatgggtaaaaagaaacccgag
gaaatggccaagcagcgcggcggtttcattgagggctgcgccaccaacaatattgacgct
gacctggcgggtaacatcttcgacctggtggagaagttcgccggttacggcttcaacaaa
tcccactccgccgcctatggcctggtgtcgtaccagaccgcctggctgaaagcccactat
ccggcgccgttcatggcggcggtactctcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcgcaccatgaagctgcgcctcgacgcgccggacgtgaacgcc
tctgagttcaagttcacggtgaacgacgaaggccgcatcatttatggcctcggcgcgatc
aagggagtcggtgaaggccccgtggaagccatcaccgaggcgcgtcaggacgggcccttc
aaggacctgttcgacttctgcgcgcgggtcgacctcaagcgcatcaacaaacgtaccctc
gacggcctgatccgcagcggcgcgctggaccgtcttggcccgtacttccatgacgagccg
aaggcctaccaggccaatatcgaccgcaatcgcgcggtgttgctcaccgccatggaagaa
gcgatcaaggccgccgaacagaccgcccggacccatgacagcggccacgccgacctgttc
ggcgggttgttcgtcgaagaagacgcggatgtgtatgccaaccaccgcaaagccaaggat
ctgaccctcaaggaacgcctcaagggtgagaaagacaccttgggcctgtacctcaccggt
cacccgattgatgagtacgaaggcgagatccgccgttttgcccgccagcgcatcatcgac
ctgaaaccggcgcgcgatacccagaccgtcgccggcatgatcattgccctgcgcgtgatg
aaaaataagaagggcgacaagatgggcttcattaccctcgatgaccgctcgggccggatc
gaagcctcgctgttcgccgacgcgttccactccgcccagtcgctgctgcagaccgacgcc
atggtggtggtggaaggggaggtcagcaacgacgacttctccggcggcctgcgcctgcgc
atcaagcgcgtgatgagcatggaagatgcacgcaccaatctggccgaaagcctgcgcctg
aaggtcaggaccgacgcactcaagggcgatcagctacgctggttgggcgacctgctcaag
cgtcaccgtggcgcgtgtccggtgaccatggagtacaccggcaacgacgccaaggccatg
ttgcagtttggcgagacctggcgaattgatccggcggatggcttgattcaagcattgcgt
gaccagttcgggcgagacaacgtcttcctccaataccgttga
DBGET
integrated database retrieval system
