KEGG   Pseudomonas orientalis: BOP93_09180
Entry
BOP93_09180       CDS       T05323                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
poi  Pseudomonas orientalis
Pathway
poi02020  Two-component system
Brite
KEGG Orthology (KO) [BR:poi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BOP93_09180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:poi03021]
    BOP93_09180
Transcription machinery [BR:poi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BOP93_09180
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF HTH_23 Sigma70_r4 HTH_11 HTH_31 HTH_20 HTH_DeoR HTH_28 HTH_38 PCI HTH_29 WSD GerE HTH_IclR
Other DBs
NCBI-ProteinID: AUZ45754
UniProt: A0A2L0RVI8
LinkDB
Position
complement(2080094..2080609)
AA seq 171 aa
MSSDHPLDPAAIGQLYQTHHAWLRGWLSRRTGCREHAADLAQETFVRLLNARRQQTLQQP
RAYLSSIARSLMIDQYRRRELERAYLESLAHFPQVEVPCEETRLLIIDSLERIDRLLDQL
KPRVREAFLLAQLDGLTCPQIAVRLGVSRATVERDLAKALHACYRLRYADY
NT seq 516 nt   +upstreamnt  +downstreamnt
atgtcgagcgatcacccactggaccctgccgccatcggccagctgtaccaaacccatcat
gcctggctgcgcggctggttgagccgacgtaccggctgccgcgagcacgccgccgacctg
gcccaggaaaccttcgtgcgcctgctcaacgcgcgccggcaacagaccttgcagcaaccg
cgcgcttacctgagcagcattgcgcgcagtctgatgatcgaccagtaccgacgccgcgaa
cttgagcgtgcctacctggaaagccttgcgcatttcccgcaggtcgaagtgccttgcgag
gaaacccgcttgttgatcatcgacagcctggagcgcatcgaccgtttgctcgatcaactc
aaaccgcgcgtgcgtgaggccttcctgctggctcaactggacggcctgacctgcccgcaa
atcgccgtgcgcctgggcgtgtccagggccacggtggagcgcgacctggccaaggcgctg
catgcctgttatcggttgcgctatgccgactattga

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