Pseudomonas orientalis: BOP93_09180
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Entry
BOP93_09180 CDS
T05323
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
poi
Pseudomonas orientalis
Pathway
poi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BOP93_09180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poi03021
]
BOP93_09180
Transcription machinery [BR:
poi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BOP93_09180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
HTH_23
Sigma70_r4
HTH_11
HTH_31
HTH_20
HTH_DeoR
HTH_28
HTH_38
PCI
HTH_29
WSD
GerE
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AUZ45754
UniProt:
A0A2L0RVI8
LinkDB
All DBs
Position
complement(2080094..2080609)
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AA seq
171 aa
AA seq
DB search
MSSDHPLDPAAIGQLYQTHHAWLRGWLSRRTGCREHAADLAQETFVRLLNARRQQTLQQP
RAYLSSIARSLMIDQYRRRELERAYLESLAHFPQVEVPCEETRLLIIDSLERIDRLLDQL
KPRVREAFLLAQLDGLTCPQIAVRLGVSRATVERDLAKALHACYRLRYADY
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgatcacccactggaccctgccgccatcggccagctgtaccaaacccatcat
gcctggctgcgcggctggttgagccgacgtaccggctgccgcgagcacgccgccgacctg
gcccaggaaaccttcgtgcgcctgctcaacgcgcgccggcaacagaccttgcagcaaccg
cgcgcttacctgagcagcattgcgcgcagtctgatgatcgaccagtaccgacgccgcgaa
cttgagcgtgcctacctggaaagccttgcgcatttcccgcaggtcgaagtgccttgcgag
gaaacccgcttgttgatcatcgacagcctggagcgcatcgaccgtttgctcgatcaactc
aaaccgcgcgtgcgtgaggccttcctgctggctcaactggacggcctgacctgcccgcaa
atcgccgtgcgcctgggcgtgtccagggccacggtggagcgcgacctggccaaggcgctg
catgcctgttatcggttgcgctatgccgactattga
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integrated database retrieval system