Pseudomonas orientalis: BOP93_09405
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Entry
BOP93_09405 CDS
T05323
Name
(GenBank) type IV secretion protein Rhs
Organism
poi
Pseudomonas orientalis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
TEN_YD-shell
DUF7586
DUF5897
TcdB_toxin_midN
Motif
Other DBs
NCBI-ProteinID:
AUZ45795
UniProt:
A0A2L0RUJ1
LinkDB
All DBs
Position
complement(2128773..2133473)
Genome browser
AA seq
1566 aa
AA seq
DB search
MIDATSQAIGFLVLAAMDAKTRDVESILSDFRGCLHPYDTWAQSFFSFSALNVEQVFKVG
EEVALVAPINRSLFPSSTVATCTANGTLTLVHMFQSSRFVPIGNTPVVVQCIDPDGGPLG
DPLHKIIGPSGILEITECDRNQKYRVSFYPDVSSEHFKALYASYQSVIASLEGWLRSEWG
TTFEPLWKGYSEANFLKRYLSLYGAYARGFSDSLYSIWDDVEQLFQWLSAPLANAEKLLH
YFSQDEFEKLLTLSAETLAKGLLVLSDEPLLFIYLAALVSWMRMLPPPYMNEMLGEIGAE
VVINLLLGLATGGMGIVLRMSTKVLAGIKSRRVRRWLEQIAEQVGKIRLVGHSEALKPVL
LGSAATPIKAVPVAPLKAGDTLVSNPVPMVRNKTQRTALVRQEPVDDVPAMASNPKGDAA
ASADKTVTNGCPVSMVTGEELLTLTDGALDGILPFEWTRLYRTSAVEVDCGLGFGWSHAL
AHRLSVSGNSVVWTDHENRSTTLPLPTAARPAITNSLAEAAIYLGSAPDELVLAQSSRFY
HFCGGVLTAISDAYDNRLRIVRDRLGRIERLDNRAGRSLFLRYEFDRIVAVDYQVHRAKG
HEPFVWVTDQNIVSYAYDDAGRLVSATNAVGEREVYRYDEQHVILERQLAGGASFFWAWE
RSGKAARCVRHWASFSQMDTRYVWGDDGSVNVHNADGSQEVYVHDDRARLVQRIDPDGAR
HFKSYDAKGRLTVEQDPLGAVTAYQYDDAGRLVALFPGEDEPTSYEHDHGFVRVVRRGEA
VWKYERNEQGDVIRRIDPEGNATDYSYDKRGQLTGVWYPDNSCHRLVWNERGQLVEEQLP
NGGIKRYRYDDLGRQLSCEDEHGALTQYQWDAVGRLLKLTQSDGTYREFSYNPYGKIIAE
RDELGHVTRYEYADGLHLISRRINADGTQVKYRYDNACLLLTEIENEVGETYRLDYHPNG
LIRQETGFDGQRTAYAYDLNGNLLEKTEHGDDGSQLVTRYERDHAGRLVRKTLPDDSVVD
YAYDRQGNLLSVEDGHWALAYEYDKQNRLTAEHQGWGTLRYGYDACGQLQHLRLPDNNRL
TFNHDKGGHLATVELNGSLLTSHLFHAGREHQRQQGKLLSHYHYDDQNRLHAHAVTQQGN
HLYQRQYDYDKAGNLTRLLDTRKGEHRYRYDPLNRLTRADHSQDVQERFAHNPAGNLLMQ
NRPGPDIVAGNRLMIQGDHHYDYDAFGNLIRERRGKGQQLVTEYRYDCQHRLIGVTKPNG
QTASYRYDPFGRRISKTIEEKTTEFFWQGDKLIAEHHADRHRSYLYEPDSFRPLALLEGF
GPEDVNPYYYQLDHLGTPQELTTPDGEIVWSAHYRAYGEISRLDVGKIDNPLRFQGQYYD
QESGLHYNRHRYYHPNIGRYLTPDPVKLAGGANAYQYAPNPTGWVDPLGLSKCPGECVPV
KGVEDPVLNAKAEENQPTLPSLKDVEWTAHGYKHSPSKKMPWKDILATTKSGPAKYKPGI
DIENLEREAYKNGRTTTNGKPWKVMEYPESIGASDGLPSRWIRIELSAGTIHGHPISEQE
FRRLTK
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgcaaccagccaagctattggcttcctggtgttggccgcgatggacgcaaag
acgcgggacgtcgaatccatcctcagcgatttccggggctgcctgcacccatacgacacc
tgggctcaaagctttttcagcttttcggcactgaatgtcgagcaagtgttcaaggtggga
gaagaagtagcgctcgtagcgccgatcaatcggtccctctttcccagcagcacggtcgcc
acgtgtacagccaacggcacgttgaccctggtgcatatgttccagagttcgcgattcgtg
ccgatcggcaacacgccggtcgtggtacagtgcatcgatccagacggcggtccgctgggg
gacccactccataaaatcatcggtcccagcggcattctggaaatcaccgagtgtgatcgc
aaccagaagtaccgagtcagtttctaccccgacgtttcttcagagcatttcaaggcgctg
tacgcttcttatcagtcggtcattgcgtcactggaaggctggttgcgcagtgagtggggg
accactttcgaacccctgtggaaggggtactccgaggcaaacttcctcaagcgctacctt
tcgctgtacggcgcctatgcccgaggtttcagcgactccctttactcaatctgggacgac
gtagagcagttatttcaatggctgtcagcccccctggccaatgctgaaaagctgctgcat
tacttttcccaggacgagtttgaaaaattactgacgttaagtgccgagacgctcgccaag
ggtctgctggtgctgagcgacgagccgttgctgttcatttacctggcggcgctggtcagt
tggatgcgcatgctgccaccgccctatatgaacgaaatgctgggcgagattggcgccgag
gtcgtcatcaatctgttactgggcctggcgacgggcggcatgggtattgtgctgcgcatg
agcacgaaagtgctggctggcatcaagtcgcgccgggtgcgcaggtggctggaacagata
gccgagcaggtcggaaaaattcgcctggtggggcatagcgaagcgctcaagccggtgctg
ctgggcagtgcggcgacgccgatcaaggcagtgccggtggcgccgttgaaggcgggcgat
acgctggtttcgaaccccgtaccgatggttcgcaacaaaacgcagcgtacggcgttggtg
cgccaggagccggtggatgatgtgcctgccatggcgtcgaatccgaagggcgatgcggcg
gcttctgcggataaaaccgttacgaacggttgcccggtgtcgatggtcaccggcgaggaa
ctgctgactctgaccgacggcgcgctggacggcatcttgccgttcgagtggacgcgcttg
tatcgcaccagtgcagtggaggtggactgcgggttggggtttggctggagtcatgcgcta
gcgcatcggctttctgtgtcaggcaactcggtggtgtggacggaccatgagaatcgctcg
accaccctgcccttgccgacggctgctaggccggcgattaccaacagtctggcggaagcg
gcgatctacttggggtctgcgcctgacgagttggtgctggcccagtcctctcggttttat
cacttttgcggcggtgtgctgaccgcgatcagcgatgcgtatgacaaccggctgcgcatt
gtccgggatcggttggggcgtattgagcggctggataaccgtgccgggcgctcgcttttt
ttgcggtatgaattcgaccgcatcgtggcggtggactaccaggtgcatcgcgccaaaggc
catgaacccttcgtgtgggtgaccgatcagaacatcgtttcctacgcctacgacgacgcc
ggacgactggtatcggcgaccaatgcggtcggtgaacgcgaggtttatcggtacgacgaa
cagcacgtcattcttgagcggcagttggccggtggggcgagtttcttttgggcgtgggaa
agatctggtaaagccgcgcgctgtgtccggcactgggccagtttttcacagatggacacg
cgctatgtatggggcgatgacggcagcgtcaacgtgcacaacgccgatggcagccaggaa
gtgtatgtccatgacgaccgggcgcgactggtacagcgcatcgatcccgacggtgcccgg
catttcaaatcctatgatgccaagggccgactgaccgtcgagcaggacccgctgggcgcg
gtgacggcgtatcagtacgacgacgccggacgcttggtggcgctgtttccgggggaggat
gagccgacatcctacgagcatgaccatggtttcgtacgggttgtgcgccgtggtgaggcg
gtctggaaatacgagcgtaatgagcaaggcgatgtcatccgcaggattgatccggagggc
aacgcgaccgactacagctacgacaagcgggggcaactgaccggtgtctggtatcccgac
aacagctgtcatcgtttggtgtggaatgagcgcgggcagcttgttgaagaacagttgccc
aatggcgggatcaagcgttatcgctatgacgatctgggccggcaattgtcgtgtgaggat
gagcacggcgcgctgactcagtatcaatgggacgcggtaggacgcctgctgaaactgacc
caatccgacggtacctatcgggaattcagctacaacccttacggaaaaatcatcgccgaa
cgcgatgaactcggccacgtcacccgttacgaatacgccgacggcctgcacctcatcagc
cgccgcatcaacgcggacggtactcaggtcaagtatcgctacgacaacgcctgccttttg
ctgactgaaatcgaaaacgaagttggcgaaacctatcgactggactaccaccccaacggc
ctgatccgacaggaaaccggcttcgacggccaacgcaccgcctacgcctacgacctcaac
ggcaacctgctggaaaagaccgaacatggcgacgatggcagtcagcttgttacccgttac
gagcgcgatcatgccggtcgcctcgtaagaaaaacgctgcccgatgacagcgttgttgat
tatgcctacgaccgccaaggcaacctcctcagcgtcgaagacggccactgggcgctggct
tacgagtacgacaaacaaaaccgactcactgctgagcatcagggctggggcactttgcgc
tacggctatgacgcctgcggccaacttcagcatttacgcctgccggataataaccgtctg
accttcaatcacgacaaaggcggccacctggccaccgtcgagctgaatggctcactgctg
acttcccacctgttccacgccggtcgcgaacaccaacgccaacaaggcaagctgctcagc
cactaccactacgacgaccaaaaccgcctgcacgcccacgccgttacccagcaaggaaac
cacctttaccaacgccaatacgactacgacaaagccggcaacctcacgcgcctgctcgac
acccgcaaaggcgaacaccgttaccgctacgacccgctaaaccgcctgacccgcgccgat
cactcccaggatgtgcaggagcgctttgcacacaacccggcgggcaatttgcttatgcaa
aacaggccgggcccggacatcgtggcgggtaatcgcctgatgatccagggcgaccaccat
tacgactacgacgccttcggcaacctgatccgcgaacggcgtggcaagggccagcaactc
gtcaccgagtaccgctacgactgccagcaccggctcatcggcgtcaccaagcccaacggc
caaaccgcgagctatcgctacgacccgtttggtcggcgcatcagcaaaaccatcgaagag
aaaactacggagttcttctggcaaggcgacaagctgatcgccgaacaccatgccgatcgc
catcgcagctacctctacgaacccgacagcttccgcccgctggcactgctggaaggcttc
ggtccagaagacgtaaatccctactactaccaactcgaccacctcggcacaccgcaggaa
ctcaccacgcccgacggtgaaatcgtctggtccgcgcactaccgcgcctacggagaaatc
agccgcctcgacgtcggcaaaatcgacaacccgctacgtttccaaggccagtactacgac
caggaaagtggcctgcactacaaccggcatcgctactaccacccgaatatcggtcgttac
ctgacgccagatccggtgaagctggcgggtggggccaatgcataccagtacgcaccgaat
cctacagggtgggttgatccgctggggcttagtaagtgtcctggtgaatgcgtgcccgtt
aaaggtgttgaagatccggtactcaatgcgaaagccgaagaaaaccaaccgacgctgccc
tcacttaaagatgtcgaatggacagcccatggttataagcacagcccttcaaagaaaatg
ccttggaaagatattttggcaaccacaaaatccgggccggccaagtacaagccgggcata
gacattgaaaacttagaacgagaagcctataaaaatggcagaacgaccaccaatggcaaa
ccatggaaagtgatggagtaccctgaaagcatcggcgccagcgatggcctacccagtcgt
tggatacgcattgagttgagtgctggaacaattcatggccatcctatctcagagcaagaa
tttcggagactaaccaaatga
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