Pseudomonas orientalis: BOP93_13745
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Entry
BOP93_13745 CDS
T05323
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
poi
Pseudomonas orientalis
Pathway
poi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BOP93_13745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poi03021
]
BOP93_13745
Transcription machinery [BR:
poi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BOP93_13745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
HTH_23
Sigma70_r4
GerE
HTH_28
HTH_38
DUF6362
HTH_29
DUF2285
TnsD
Tau95
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AUZ46610
UniProt:
A0A2L0RX58
LinkDB
All DBs
Position
complement(3158419..3158937)
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AA seq
172 aa
AA seq
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MNDAVVPTHAPEPTVSSLYRDHYSWLESWLRRRLGNAWDAADLSQDTFLRVLASAQPIEQ
MQEPRAYLVTVGKRLLVNFHQRRSLEQAYLNALASLPQACVPSPEQRWLLLETLHALDDL
LEGLPVQVRRAFLWSQLEGLGYREIAARLNVCERTVKRYMSQAYEHCLLVNL
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgctgttgtaccgacccatgcccccgaaccgaccgtgtcgagcctgtaccgc
gaccattacagctggctggaaagctggctgcgccggcgtttgggcaatgcctgggacgcc
gcggacctgagccaggataccttcctgcgcgtgctcgccagcgcgcagccgatcgagcag
atgcaggagccgcgcgcctatctggtgaccgtcggcaaacgcctgctggtgaatttccat
cagcggcgcagcctcgaacaggcttatctgaatgcattggccagcctgccgcaggcctgc
gtgccttcgccggaacaacgctggctgttgctggaaaccttgcacgccttggacgacctg
cttgagggtttaccggtgcaggtgcgccgcgcttttctgtggagccagctggaaggcctg
ggttatcgggagatcgccgcacgcctcaacgtctgcgagcgcacggtaaaacgctacatg
tcccaggcctatgaacactgcctgctggtgaacctgtga
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integrated database retrieval system