KEGG   Pseudomonas orientalis: BOP93_13745
Entry
BOP93_13745       CDS       T05323                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
poi  Pseudomonas orientalis
Pathway
poi02020  Two-component system
Brite
KEGG Orthology (KO) [BR:poi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BOP93_13745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:poi03021]
    BOP93_13745
Transcription machinery [BR:poi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BOP93_13745
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF HTH_23 Sigma70_r4 GerE HTH_28 HTH_38 DUF6362 HTH_29 DUF2285 TnsD Tau95 HTH_17
Other DBs
NCBI-ProteinID: AUZ46610
UniProt: A0A2L0RX58
LinkDB
Position
complement(3158419..3158937)
AA seq 172 aa
MNDAVVPTHAPEPTVSSLYRDHYSWLESWLRRRLGNAWDAADLSQDTFLRVLASAQPIEQ
MQEPRAYLVTVGKRLLVNFHQRRSLEQAYLNALASLPQACVPSPEQRWLLLETLHALDDL
LEGLPVQVRRAFLWSQLEGLGYREIAARLNVCERTVKRYMSQAYEHCLLVNL
NT seq 519 nt   +upstreamnt  +downstreamnt
atgaatgatgctgttgtaccgacccatgcccccgaaccgaccgtgtcgagcctgtaccgc
gaccattacagctggctggaaagctggctgcgccggcgtttgggcaatgcctgggacgcc
gcggacctgagccaggataccttcctgcgcgtgctcgccagcgcgcagccgatcgagcag
atgcaggagccgcgcgcctatctggtgaccgtcggcaaacgcctgctggtgaatttccat
cagcggcgcagcctcgaacaggcttatctgaatgcattggccagcctgccgcaggcctgc
gtgccttcgccggaacaacgctggctgttgctggaaaccttgcacgccttggacgacctg
cttgagggtttaccggtgcaggtgcgccgcgcttttctgtggagccagctggaaggcctg
ggttatcgggagatcgccgcacgcctcaacgtctgcgagcgcacggtaaaacgctacatg
tcccaggcctatgaacactgcctgctggtgaacctgtga

DBGET integrated database retrieval system