Pseudomonas orientalis: BOP93_14565
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Entry
BOP93_14565 CDS
T05323
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
poi
Pseudomonas orientalis
Pathway
poi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BOP93_14565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poi03400
]
BOP93_14565
DNA repair and recombination proteins [BR:
poi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BOP93_14565
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BOP93_14565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
SMC_N
nSTAND1
AAA_29
DnaJ_CXXCXGXG
AAA_16
AAA_25
DUF4350
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
AUZ46771
UniProt:
A0A2L0RXR6
LinkDB
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Position
complement(3362990..3365509)
Genome browser
AA seq
839 aa
AA seq
DB search
MTSQHNTPPSTVQHTGFVRVRGAREHNLRNVDVDIPRDALVVFTGVSGSGKSSLAFSTVY
AEAQRRYFESVAPYARRLIDQVGVPDVDSIEGLPPAVALQQQRGTPSARSSVGSVTTLSS
LIRMLYSRAGRYPPGQAMLYAEDFSPNLPQGACPQCHGLGRVYEVTEALMVPDPSLTIRQ
RAVAAWPLAWQGQNLRDILVTLGYDVDIPWRDLPKKQRDWILFTEETPTVPVYAGFTPAQ
TRDALKRKLEPSYQGTFSGARRYILHTFAHTQSALMKKRVSQFMQGSACPLCEGKRLTRA
ALSVKFAGVDIGELSQLSLTRLAELLRPVAAGQDKMKLSVEKRLAAQRIAEDLLERVTTL
IELGLGYLSLERSTPTLSSGELQRLRLATQLGSQLFGVIYVLDEPSAGLHPADGEALFSA
LARLKAAGNSLFVVEHDLETMRRADWLIDVGPAAGEHGGQVLYSGPPAGLADVAASQTRD
YLFAQPRALNPTRREPSGWLKLQGVTRNNLKNLAVDFPLGCFTAVTGISGSGKSSLVSQA
LLELVSSGLGRVLESTDEPSLEDAAPVASEGRISAGLEQIRRLVQVDQKPIGRTPRSNLA
TYTGLFDNVRKLFAATPAAKKRGYDAGQFSFNVAKGRCPNCEGEGFVSVELLFMPSVYAP
CPTCHGARYNPETLAVKWQGLSIAQVLGLTVEEAVEVFAEQPGVLRALQVLRDIGLGYLR
LGQPATELSGGEAQRIKLATELQRTARGATLYVLDEPTTGLHPRDVDRLLSQLNQLVEAG
HTVVVVEHEMRVVAQSDWVIDIGPGAGNAGGKVVASGTPQAVAGSKDSRTAPFLARELI
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgacttcacagcacaacactcctccatcgaccgtccagcacaccggcttcgtgcgggtg
cgcggcgctcgcgaacacaacttgcgtaacgtcgacgtggatattccccgcgatgccctg
gtggtgtttaccggtgtgtccggttccggcaagtcgtccctggcgttttctaccgtgtat
gccgaggcccagcgtcgctatttcgaatcggtggcgccctatgcgcgacgcctgatcgac
caggtcggcgtgccggatgtcgacagtatcgaaggcttgccgcccgccgtggccctgcaa
cagcagcgtggcacgccgagtgcgcggtcctcggtgggcagcgtgaccaccttgtcgagc
ctgatccgcatgctgtattcccgcgccggccgttacccgccggggcaggcgatgctgtac
gccgaggacttttcgccgaacctgccccagggcgcgtgcccgcaatgccatggcctgggc
cgcgtgtatgaagtgaccgaagcgctgatggtgcccgacccgtccctgaccatccgccag
cgcgcggtggcggcctggccgctggcatggcagggccagaacctgcgggacatcctcgtg
accctgggttacgacgtggatatcccgtggcgcgacctgccgaaaaaacagcgcgactgg
atcctgttcaccgaagaaacccccaccgtaccggtgtacgccggcttcaccccggcgcag
acccgcgatgccttgaaacgcaagctggagcccagttaccagggcactttcagcggtgcg
cggcgctacatcctgcacacctttgcccacacccagagcgcgctgatgaaaaagcgcgtg
tcgcagttcatgcaaggcagtgcctgtccgttgtgcgagggcaagcggctgacccgggcg
gcgctgtcggtgaagtttgccggggtggatatcggtgagctgtcgcaactgtccctgacc
cgcctggccgagctgctgcggccggtggcggcggggcaggacaagatgaaactgtcggtg
gaaaagcgtttggccgcccagcgcatcgccgaggatctgctcgaacgggtcacgaccttg
atcgagctgggcctgggctatctgtccctggagcgcagcacgccgacgctgtcgtccggg
gagttgcagcgtttgcgcctggccacgcaactgggctcgcaattgttcggagtgatctac
gtgctggacgagccttcggcgggcctgcatccggcggacggcgaagccttgttcagcgcg
ctggcgcgtttgaaagcggccggcaattcgctgtttgtggtggagcatgacctggaaacc
atgcgccgcgccgactggttgatcgatgtcggcccggccgccggcgagcacggcgggcaa
gtcctgtacagcggcccgcctgcggggttggcggatgtcgccgcgtcgcagacccgtgac
tacctgtttgcccaaccgcgggccttgaaccccacccggcgggaacccagtggctggctg
aagctgcaaggggtgacgcgcaacaacctgaagaaccttgccgtggatttcccgctgggc
tgcttcacggcggtgaccgggatttccggttcgggtaaatccagcctggtcagccaggcg
ctgctggaactggtcagcagcggcctcgggcgcgtgctggaaagcaccgacgagcccagc
ctggaagacgctgcgcctgtcgccagcgaagggcgcatcagcgccgggctggagcagatc
cggcgtctggtgcaggtggaccagaaacccatcggccgtacgccgcgctccaatcttgcg
acctataccgggctgttcgacaacgtgcgcaaactgttcgccgccacgccggcggcgaag
aagcgcggctacgacgcggggcaattttccttcaacgtcgccaagggccggtgcccgaac
tgcgagggcgaggggtttgtcagcgtcgagttgctgttcatgcccagcgtgtatgcgcca
tgcccgacctgccacggggcgcgttacaaccccgagaccctggcggtcaaatggcaaggc
ttgagcatcgcccaagtgctgggcctgactgtggaggaagcagtcgaggtgtttgccgaa
cagcccggcgtgctgcgcgccctgcaggtgctgcgcgatatcggcctgggctatctgcgc
ctgggccagccggccaccgagttgtcgggcggtgaagcgcagcgcatcaagctggccacc
gagctgcaacgcacggcgcggggcgccaccttgtacgttctggacgaaccgaccaccggg
ctgcatcccagggatgtcgaccgcttgctcagccagctcaatcaattggtggaagcgggg
cataccgtggtggtggtcgagcatgaaatgcgcgtggtggcgcagagcgactgggtgatc
gatatcggccccggcgccggcaatgcgggcgggaaggtggttgccagtggtacgccgcag
gccgtcgccggcagcaaggacagccgcacggcgccgtttctggcgcgtgaacttatctag
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