Pseudomonas orientalis: BOP93_16460
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Entry
BOP93_16460 CDS
T05323
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20330
LuxR family transcriptional regulator, activator of tox operons
Organism
poi
Pseudomonas orientalis
Pathway
poi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BOP93_16460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
poi03000
]
BOP93_16460
Transcription factors [BR:
poi03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
BOP93_16460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
BAG6
Sigma70_r4_2
HTH_10
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AUZ47122
UniProt:
A0A2L0RYP9
LinkDB
All DBs
Position
3802957..3803751
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AA seq
264 aa
AA seq
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MSLTPSITDTQGPHFYAEMGELISSSGQENFAANMLHLVDQWIPIHLVDLSEWSLDELRD
SVLDIQLLGSAGLNQDLPAPQTLHALDDHPLLRQMLRMQDPLLIQMKAKANSAHPRGSSH
QCNLVSRQGHRRCVISFYRPPAERGFSLAELSFLKCLSETLLPLMERHVQILRQAPHAEV
EPGHNGLEQSQLQREFYKRLSLSDITLSAREQEVCLGLLTGGTVPQIAEKLSVKNSSIET
YLKRAAAKLGVSGRHGLAKWMVGA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgaccccgagtatcaccgacacccagggcccacatttctacgccgaaatgggc
gagctgatttcaagcagcggtcaggaaaatttcgccgcgaacatgctgcacctggtggac
caatggataccgattcatctggtagacctcagcgaatggagcctcgatgagctgcgtgac
agcgtgttggatatccaactgctgggcagtgccggcctgaaccaggacctgcccgcgccc
cagaccctgcacgcgcttgacgaccaccctttgctgcgacagatgctgcgtatgcaggac
ccgctgctgatccagatgaaagccaaggccaacagcgcacacccgcgcggcagttcgcac
cagtgcaacctggtctcgcgccagggccatcggcgctgtgtgatttcgttctatcgcccg
cccgccgagcgcgggttttccctggcggaactgtcgtttctcaaatgtctgtccgagacc
ttgctgccgctgatggagcgccacgtgcagatcctgcgccaggcaccgcacgccgaggtg
gagcctgggcacaacgggctggagcaatcgcaattgcagcgtgagttctacaagcgcttg
tcgctgagcgacatcaccctctcggcccgcgagcaggaagtttgcctgggcctgttgacc
ggcggcaccgtgccgcagatcgcggaaaaactcagtgtgaaaaacagctcgattgaaacc
tacctcaagcgcgccgccgccaagctcggcgtgagtggccgacacggcctggccaaatgg
atggtgggcgcctga
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