Pseudomonas orientalis: BOP93_18140
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Entry
BOP93_18140 CDS
T05323
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
poi
Pseudomonas orientalis
Pathway
poi02020
Two-component system
poi02025
Biofilm formation - Pseudomonas aeruginosa
poi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BOP93_18140
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
BOP93_18140
09142 Cell motility
02040 Flagellar assembly
BOP93_18140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poi03021
]
BOP93_18140
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
poi02035
]
BOP93_18140
Transcription machinery [BR:
poi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BOP93_18140
Bacterial motility proteins [BR:
poi02035
]
Flagellar system
Flagellar assembly proteins
Stator
BOP93_18140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
MarR_2
GerE
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
AUZ47430
UniProt:
A0A0R3A5J3
LinkDB
All DBs
Position
complement(4189197..4189937)
Genome browser
AA seq
246 aa
AA seq
DB search
MTANGYNAYKKSARDSQGELIERYAPLVKRIAYHLLARLPASVQVEDLIQAGMIGLLEVS
TKYDASKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRAIEAKTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASAHMEPSRDLEDE
RFQGALAEAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRGRL
GEWRAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgaacggctacaacgcctacaagaaatccgcccgtgacagccagggcgagttg
atcgagcgctatgcgccattggtcaagcgcattgcttaccacctgttggcacgcctgccc
gcgagcgtccaggtcgaagacttgatccaggccggcatgatcggcctgctcgaagtgtcg
accaaatatgacgcgagcaagggcgccagtttcgagacgtacgcgggtatccgtatccgt
ggcgcgatgctcgacgaggtgcgcaaaggagactgggcgccacgttcggtacaccgcaat
acgcgcatggtcagtgacgcaattcgcgcaattgaagcaaaaactggtcgtgacgctaaa
gatcatgaagttgcggccgaactccaattgagtctcgacgattattacgggattttgaac
gataccttgggcagccgcctgttcagtttcgacgacctgttgcaggacggcgaacacgaa
gggctgcacgaggacggcgcgagcgcgcatatggagccgtcgcgcgatctggaagatgaa
cgtttccagggcgcgttggcggaggccattgccaatttgccggagcgcgagcgcctggtg
ttggcgctgtactacgacgaagagctgaacctcaaggaaatcggtgaggtcctgggggtc
agcgaatcgcgtgtcagccagttgcatagccagtgcgcggcccgcttgcgggggcggttg
ggagagtggcgcgcgcgctga
DBGET
integrated database retrieval system
