Pseudomonas orientalis: BOP93_18260
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Entry
BOP93_18260 CDS
T05323
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
poi
Pseudomonas orientalis
Pathway
poi02020
Two-component system
poi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BOP93_18260
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BOP93_18260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
poi02022
]
BOP93_18260
02035 Bacterial motility proteins [BR:
poi02035
]
BOP93_18260
Two-component system [BR:
poi02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
BOP93_18260
Bacterial motility proteins [BR:
poi02035
]
Flagellar system
Flagellar assembly proteins
Others
BOP93_18260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
AAA
AAA_2
AAA_3
HTH_30
MerR
FleQ
HTH_20
AAA_19
HTH_24
HTH_23
HTH_28
nSTAND3
HTH_11
AAA_22
Sigma70_r4_2
HTH_1
HTH_17
AAA_7
ATPase
MTA_R1
DUF2249
NACHT
Myosin_head
TIP49
AAA_14
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AUZ47454
UniProt:
A0A2L0S0B9
LinkDB
All DBs
Position
complement(4212106..4213482)
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AA seq
458 aa
AA seq
DB search
MTIKVLLVEDDRALREALADTLLLAGHDYRAVGSAEEALEAVERETFSLVVSDVNMPGMD
GHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALIELVARHALG
VMSTVEGDGPIAFEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSSRARQ
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQA
KLLRVLQEREVERVGARKPIQLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWRP
LRERPADIIPLAERLLNNHVKKMKHAQARLSAEAQACLVAYPWPGNVRELDNAIQRALIL
QQGGLIQPQDFCLAMGNGVAPLPSLAPAPLAAETESAGALGDDLRRREFQMIIDTLRAER
GRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFAT
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgactatcaaggttttactggttgaagacgatcgcgccctgcgtgaagcattggctgac
acgctgctgttggcgggccatgactaccgcgcggtcggctctgccgaggaagccttggag
gccgtggagcgggaaactttcagcctggtggtcagtgatgtgaacatgcccggcatggac
ggccatcagttgctcggcctgctgcgcgcgcgccagccgcaattgccggtgctgctgatg
accgcccatggcgccgtggagcgggccgtggacgccatgcgccagggcgcggcggattat
ctggtcaagccgttcgaacccaaggcgttgatcgaactggtggcgcggcatgcgcttggc
gtcatgtcgacggtggagggcgatggcccgattgccttcgagccggccagcgcgcagttg
ctggaactggcggcccgggttgcgcgcagcgattccaccgtattgatctcgggggagtcc
ggcaccggcaaggaagtgttggcgcgttatatccaccagcaatccagtcgggcgcggcag
ccctttatcgcgatcaactgcgcggcgattccggacaacatgctcgaagccaccctgttc
ggccatgaaaagggctcgttcaccggcgccatcgcggcccaagccggcaagttcgagcag
gccgacggcggcaccattctgctcgacgaaatctcggaaatgcccctgggcctgcaagcc
aaattgctgcgcgtgttgcaggagcgcgaagtggagcgggtgggcgcgcgcaaaccgatc
cagctggatatccgcgtggtcgccaccaccaaccgcgacctggccggcgaagtggcggca
gggcgctttcgcgaagacttgttctaccgtctgtcggtgttcccgctggcctggcgcccg
ttgcgcgaacgcccggcggatatcattcccctggccgagcgcctgctgaacaaccacgtc
aaaaaaatgaagcacgcccaggcgcggctgtcggccgaagcccaggcctgcctggtcgct
tatccatggcccggcaacgtgcgcgagctggacaacgcgatccagcgtgcactgatcctg
cagcagggcggcttgatccagccccaggatttctgcctggccatgggcaatggcgtggcg
ccgttgccaagcctggcgcctgcaccgctcgccgccgaaaccgaatcggccggcgccctg
ggcgatgacctgcgccgccgcgaattccagatgatcatcgacaccctgcgcgccgagcgc
ggccgccgcaaggaagcagccgagcgccttggcatcagcccgcgcaccctgcgctacaag
ctggcgcagatgcgcgacgccgggatggacgtggaagcgtacctgttcgccacctga
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