Pseudomonas orientalis: BOP93_18660
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Entry
BOP93_18660 CDS
T05323
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
poi
Pseudomonas orientalis
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
poi03009
]
BOP93_18660
Enzymes [BR:
poi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BOP93_18660
Ribosome biogenesis [BR:
poi03009
]
Prokaryotic type
rRNA helicases
BOP93_18660
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
AUZ47532
UniProt:
A0A2L0RZS8
LinkDB
All DBs
Position
complement(4300473..4301819)
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AA seq
448 aa
AA seq
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MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPVLN
RLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVAECVNRQQTM
LFSATTGGSTLRDMVAKVLNDPEHLQVNNVSDLNATTRQQIVTADHNVHKEQILNWLLAN
ETYQKAIVFTNTRAAADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKAGGVKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYTGPKKVKASGKAVGVKKKKTDAKGDKKKAGAKSPTKRKIANR
PKTDNLSLVSKDGMAPLKRRKPQAPAAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagcttaaattt
gtcgagcctacgcctgtgcaggcagcggccatcccgctcgcgctccaggggcgtgacctg
cgggtgacggcgcaaaccggtagcggcaagaccgctgctttcgtcctgccggtgctcaac
cgcctgatcggcccggccaaggtccgcgtcagcatcaagaccctgatcctgctgccgact
cgcgagctggcccagcagaccctgaaggaagtcgagcgcttctcgcagttcaccttcatc
aagtccggcatcattaccggtggcgaagacttcaaggtccaggccgccatgctgcgcaag
gtcccggatatcctgatcggcaccccgggccgcatgatcgagcaactcaatgccggcaac
ctcgacctcaaggaagtcgaagtgctggtgcttgacgaagccgaccgcatgctcgacatg
ggctttgccgacgacgtgcagcgcctggtggccgaatgcgtcaaccgccagcagaccatg
ctgttctccgccaccaccggtggctcgaccctgcgcgacatggtcgccaaggtgctgaac
gaccccgagcacctgcaggtcaacaacgtcagcgacctgaacgcgaccacgcgtcagcag
atcgtcaccgctgaccacaacgtgcataaagaacagatcctcaattggctgctggccaac
gagacctatcagaaggctatcgtcttcaccaacacccgcgccgctgccgaccggatctac
gggcgcctagtggcgcaggaatacaaggcgttcgtgctgcacggcgaaaaggaccagaag
gaccgcaagctggccatcgatcgcctcaaggccggcggcgtgaagatcctggttgccacc
gacgttgccgcgcgcggccttgacgtggatggcctggacctggtgatcaacttcgacatg
ccgcgcagcggcgacgaatacgtgcaccgtatcggccgtaccgggcgtgccggcaacgat
ggcctggccatctcgctgatctgtcacggcgactggaacctgatgtcgagcatcgagcgc
tacctcaagcaatcgttcgagcgccgcaccatcaaggaagtcaaaggcacctacaccggg
ccgaagaaggtcaaggcctcgggcaaggccgtcggggtgaagaagaaaaagaccgacgcc
aagggcgacaagaagaaggccggcgccaagtcgccgaccaagcgcaagatcgccaaccgg
ccgaagaccgacaacctgtcgctggtcagcaaggacggcatggccccgctcaagcgccgc
aagccgcaagcgccggctgccgagtaa
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