Pseudomonas orientalis: BOP93_18915
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Entry
BOP93_18915 CDS
T05323
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
poi
Pseudomonas orientalis
Pathway
poi03030
DNA replication
poi03430
Mismatch repair
poi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BOP93_18915
03430 Mismatch repair
BOP93_18915
03440 Homologous recombination
BOP93_18915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poi03032
]
BOP93_18915
03400 DNA repair and recombination proteins [BR:
poi03400
]
BOP93_18915
Enzymes [BR:
poi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BOP93_18915
DNA replication proteins [BR:
poi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BOP93_18915
DNA repair and recombination proteins [BR:
poi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BOP93_18915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
ResIII
AAA_14
AAA_16
AAA_18
TIP49
AAA_30
PIF1
AAA_2
AAA_19
TsaE
nSTAND3
DUF3646
AAA_7
HasA
Rad17
Mg_chelatase
SKI
zf-CXXC
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AUZ47580
LinkDB
All DBs
Position
complement(4353379..4355436)
Genome browser
AA seq
685 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGTLDHGQVFDVLHALIEGDAKALLEAVRHLSEQGPDWNGVLSEILNVLHRVAIAQALPE
AVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADSADAPRQPLKPVGISQATADSAKPVAGAAVVAPVAVAPPAVAEPVVAAPVAEPEALIE
AEPEPQIAPVVDLPWNDPVEAPVEPEQQPAVEPVLDTTGEQPELTPMPAPTPDSVVLDAP
EWVSAPVPEPTVAQVEAATPGIDLDDEPPLDEDYIEPDMDSAYSYLDELASEHTAEPAPE
PEVEPAAAPATGLALQWLELFPKLPISGMTGSIAANCTLIAIDGDHWLLHLDPAHSALFN
ATQQRRLNDALNQYHGRTLTIAIELIKPEQETPAQAATRRRLNRQRDAEASIQADPLIQQ
MMQQFGAVVRHDTIEPVEAPAPQAS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggctctgatcaatgccttggacagccagcggctgcaccacgcc
tacctgttcaccggtacccgcggcgtgggcaagaccaccattgcgcgcatcatcgccaaa
tgcctgaattgtgaaaccggtatcacctcgacgccgtgcggcacctgttcggtgtgccgc
gagatcgacgaagggcgtttcgtcgacctgatcgagatcgacgccgcgagccgcaccaag
gtcgaagacacccgcgaactgctcgacaacgtgcagtacgcaccgagccgtggccgcttc
aaggtctacctgatcgacgaagtgcacatgctgtccagccattccttcaacgcgctgttg
aagaccctggaagagccgccgccctacgtcaaattcatcctggccaccaccgacccgcag
aaacttcctgcgacgattttgtcgcggtgcctgcaattctccctgaagaacatgaccccc
gagcgggtggtcgagcatttgacccacgtgctgggtgtcgagaacgtaccgttcgaagac
gacgcactgtggttgctgggccgcgctgccgatggctcgatgcgggatgccatgagcctc
accgaccaggccatcgcctttggtgaaggcaaggtcctggccgccgatgtgcgcgccatg
cttggcacgctggaccacggccaggtgttcgacgtgctgcacgcgctgatcgagggcgat
gccaaggccttgctcgaagccgtgcgccacttgtcggagcaggggccggactggaatggc
gtgctctcggaaatcctcaacgtgctgcaccgcgtcgccatcgcccaggcattgcctgag
gcggtcgacaacggccatggcgaccgcgaccgcgtgttggcgctggcccaggcgctgccg
gccgaagacgtgcagttctattaccagatgggcctgatcggccgtcgcgacctgcccctg
gcgccggacccgcgcgggggcttcgagatggtcctgctgcgcatgctggccttccggccc
gccgactcggcagatgcgccgagacagccgctaaagccagtggggatcagccaggccaca
gctgattccgccaaaccagtggctggtgcggcggtcgtcgcgccagtggcggttgcaccc
ccagcggttgccgagccggtggttgccgccccggtggccgagcctgaagcgctgatcgag
gctgagcctgagccgcaaatcgccccggtggtggatctgccctggaacgacccggttgaa
gcgcccgtcgaacccgagcaacagcccgccgtggagccggtactggacaccaccggcgag
cagcccgaactgacgccaatgcccgcgccgaccccggacagcgtagtgctggatgcgccg
gagtgggtatcggcgccggtgccggagccgactgtggcccaggtcgaggcggccaccccc
ggtatcgacctcgacgacgaaccgccgctggacgaagactacatcgagccggacatggat
tcggcctacagctacctggacgaactcgccagcgaacacaccgccgagcccgcgcccgag
ccggaagtggagcccgctgcggccccggccaccggcctggccctgcaatggctggaattg
tttccaaagttgccgatctccggcatgaccggcagtatcgccgccaactgcacgctgatt
gccatcgacggcgaccactggctgctgcacctggacccggcccacagcgccctgttcaat
gccacccagcagcgccggctcaacgacgcgctcaaccagtaccatgggcgcacgctgacc
atcgccatcgagctgatcaagcccgagcaggaaaccccggcccaggctgcgacgcgtcga
cgcctgaaccgccagcgcgacgccgaggcgtcgatccaggctgatccgcttatccaacaa
atgatgcaacagttcggtgcggtcgtccgtcacgatactattgaacctgtcgaagccccg
gcgccccaggcgtcatga
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