Pseudomonas orientalis: BOP93_20140
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Entry
BOP93_20140 CDS
T05323
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
poi
Pseudomonas orientalis
Pathway
poi00061
Fatty acid biosynthesis
poi00071
Fatty acid degradation
poi01100
Metabolic pathways
poi01212
Fatty acid metabolism
poi02024
Quorum sensing
poi04146
Peroxisome
Module
poi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BOP93_20140
00071 Fatty acid degradation
BOP93_20140
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BOP93_20140
09145 Cellular community - prokaryotes
02024 Quorum sensing
BOP93_20140
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
poi01004
]
BOP93_20140
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
poi04147
]
BOP93_20140
Enzymes [BR:
poi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BOP93_20140
Lipid biosynthesis proteins [BR:
poi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BOP93_20140
Exosome [BR:
poi04147
]
Exosomal proteins
Exosomal proteins of breast milk
BOP93_20140
Exosomal proteins of breast cancer cells
BOP93_20140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
AUZ47798
UniProt:
A0A2L0S0J6
LinkDB
All DBs
Position
complement(4617754..4619445)
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AA seq
563 aa
AA seq
DB search
MNEDFWKDKYPAGIAAQINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTAVKHVIVTEVADLLSPFKRLLINSVIKYVKKLVPAYH
LPQAIKFNDVLAKGHGQAVSDANPASGDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEGFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCAICEGYGM
TETSPVATVNPIQHIQIGTIGIPVPSTVCKVIADDGTELALGETGELCVKGPQVMKGYWQ
REDATAEMLDSEGWLKTGDIAIIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAGLPG
VLQCAAIGVPDEKSGEHIKLFIVVKPGATLTKEQVMEHMRANVTGYKVPRAVEFRDALPT
TNVGKILRRELRDEELKKLGLKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagacttttggaaggataagtaccccgccgggattgctgcacaaatcaatccg
gacgagtatccgaatattcaggcggtactgaagcagtcctgccagcgcttcgccaacaaa
ccggctttcagcaacctgggcaagaccatcacctacggtgaactgtacgaattgtccggc
gcgtttgccgcctacctgcaacagcataccgacttgaagcccggcgatcgaatcgccgtg
caactgcccaacgtcctgcagtacccggtcgctgtattcggcgccatccgtgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacatcaattcaacgac
tccggagccaaggccctggtctgcctggccaacatggcgcacctggctgaaaaagtcgtg
cccaagaccgccgtcaagcacgtgatcgtgaccgaagtggccgacctgttgtcgccgttc
aagcgcctgttgatcaacagcgtgatcaagtacgtgaagaaattggtcccggcgtatcac
ctgccgcaagcgatcaagttcaatgacgtgctggccaaggggcacggccaagcggtcagc
gatgccaacccggccagcggcgatgtggcggtgttgcagtacaccggcggcaccaccggc
gtggccaaaggcgcgatgctcacccatcgcaacctggtcgccaacatgctgcaatgcaag
gcgctgatgggctccaacctcaatgaaggttgcgaaatcctgatcacgccgctgccgctg
taccacatctatgcgttcacctttcattgcatggcgatgatgctgatcggcaaccacaac
atcctgatcagcaacccgcgcgacttgcccgcgatggtcaaggaactgtctaagtggaag
ttcagcggctttgtcggcctcaacacgttgttcgtggcactgtgcaacaacgaaggtttc
cgcaagctggatttctccgcgctcaaggtcaccctgtcaggcggcatggcgctgcaactg
gcggcggccgaacgctggaaggccgtgaccggttgtgccatctgcgagggctacggcatg
actgaaaccagcccggtggccactgtgaacccgatccagcatatccagatcggcaccatt
ggcattccggtgccttccaccgtgtgcaaggtgattgccgacgacggcaccgagttggcg
ctgggcgaaaccggcgagctgtgcgtcaagggcccgcaagtgatgaagggctattggcag
cgtgaagacgccaccgccgagatgctcgacagcgaaggctggctgaagaccggtgacatc
gcgatcatccagcccgatggctacatgcgtattgtcgaccgcaagaaggacatgatcctg
gtctcgggcttcaacgtgtaccccaacgaactggaagacgtgctggcaggcctgccgggt
gtgttgcagtgcgcggccatcggcgtaccggatgaaaagtccggggagcacatcaagctg
ttcattgtggtcaagccgggggctaccctgaccaaggagcaggtgatggaacatatgcgc
gccaatgtcaccggctacaaggtgcccagggcggttgagttccgcgatgcgttgccgacc
accaacgtgggcaagatcctgcggcgtgaattgcgcgacgaagaactcaagaagctcggc
cttaaaaagtaa
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