Pseudomonas orientalis: BOP93_21235
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Entry
BOP93_21235 CDS
T05323
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
poi
Pseudomonas orientalis
Pathway
poi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BOP93_21235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poi03400
]
BOP93_21235
Enzymes [BR:
poi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BOP93_21235
DNA repair and recombination proteins [BR:
poi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BOP93_21235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF4807
Motif
Other DBs
NCBI-ProteinID:
AUZ49129
UniProt:
A0A2L0S485
LinkDB
All DBs
Position
4870599..4871978
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AA seq
459 aa
AA seq
DB search
MIKDPFARLGLDREVLTVSQLNGRARVLLEDVFTNIWVEGEISNLARPASGHVYFTLKDS
GAQVRCALFRNNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAF
DALKEKLSAEGLFSAERKVPLPAHPRRIGIISSPTGAVIRDIISVFRRRAPNIELTLIPT
AVQGREAIAQIVRALKLADARGFDALILARGGGSLEDLWCFNEEAVARAVDACVTPIVSA
VGHETDVSISDFVADVRAPTPSAAAELLAPDASHLVRQVENLQRRLVLLMHNRLRHDRLR
LEGMARRLRHPGERLRQQAQRLDDLDMRLRRAFERSLNTRRERLIRLETRLAGQHPGRQL
ALLRQRLDSLAERLPRAMREGLKARRLQLQSQVQTLHVVSPLATLGRGYSILLDERGQAI
RNAAQTHTGQRLTARLGEGQLQVRVEDNHLTPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagatccttttgcccgactgggcctggaccgcgaagtcctgactgtcagccag
ctcaacggccgcgcgcgggtgttgctggaagacgtgttcaccaatatctgggtggaaggc
gagatctccaacctcgcccgcccggcttcgggccacgtgtatttcaccctcaaggacagc
ggcgcccaagtgcgttgcgcgctgtttcgcaacaacgccgcgcgggtacgccaggcgttg
aaggacggcctggcggtgaaggtgcgcggcaaggtctcgctgttcgagggccgtggcgac
taccagttgatcctcgacaccgtggagcctgccggtgatggcgcgttgcgactggccttc
gatgccttgaaggaaaagctcagcgccgaaggcctgttcagtgccgagcgcaaggtgccc
ttgccggcgcatcctcggcgcatcggtattatcagttcgccgaccggcgcggtgattcgc
gatatcatcagcgtgttccgccgccgcgcgccgaacattgaattgaccttgatcccgacc
gccgtacagggccgcgaagccatcgcacagattgtgcgtgcgctgaagctggccgacgca
cgcggcttcgacgcgctgatcctggcccgtggcggcggctcgctggaagacctctggtgc
ttcaacgaagaagccgtggcccgggcggtggacgcctgcgtcacgcccatcgtcagcgcg
gtcggccatgaaaccgatgtatcgatcagcgacttcgtggcggacgtgcgcgcccctacc
ccctccgctgccgctgaactgctggcaccggacgccagtcacctggtgcgccaggtcgaa
aacctgcagcgccgcctggtgctgttgatgcacaaccgcctgcgccatgatcgcctgcgc
ctggagggcatggcccgacgcctgcgccaccctggcgaacgcctgcgccagcaggcccag
cgcctggacgacctggacatgcgcctgcgccgcgcgttcgagcgcagcctcaatacccgt
cgcgaacgcctgattcgcctggaaacccgcctcgccggccaacatccggggcgtcaactg
gccttgctgcgccagcgcctggacagcctcgccgagcgcctgccccgtgccatgcgcgaa
ggcctcaaggcgcggcgcctgcaactgcaaagccaggtgcagacgctgcacgtggtcagc
ccgctggccaccctgggccgtggctacagcatcctgctcgacgagcgcggccaggcgatt
cgcaatgctgcgcaaacccacaccggccagcgcctgaccgcacgcctcggtgaaggccaa
ctgcaggtgcgggtggaagacaatcacctgacccccgtcaccctatctctactggattga
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