Pseudomonas orientalis: BOP93_21955
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Entry
BOP93_21955 CDS
T05323
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
poi
Pseudomonas orientalis
Pathway
poi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BOP93_21955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poi03400
]
BOP93_21955
Enzymes [BR:
poi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BOP93_21955
DNA repair and recombination proteins [BR:
poi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BOP93_21955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
SH3_13
Helicase_RecD
Viral_helicase1
AAA_22
UvrD-helicase
AAA_16
SLFN-g3_helicase
AAA_17
NACHT
AAA_28
T2SSE
AAA_25
AAA_5
NTPase_1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AUZ48148
UniProt:
A0A2L0S1J2
LinkDB
All DBs
Position
complement(5022065..5024134)
Genome browser
AA seq
689 aa
AA seq
DB search
MSLSPLLLEELSPLSRAADLVQLLERWVDRGWLRALDRAFVGFLHELDPQADPLVLLAAA
LTSHQLGHGHVCLDLFETLQAPDFALSLPPEGDLQTGAMLLPSQLLEGLDGAHWCHVLAT
SRLVAPAFDDSESARSRPLVLSGTRLYLRRYWAYERRIDSALRLRLASHESVAADLPQRL
NGLFDQPAPDGVIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVESGNP
LRIRLAAPTGKAAARLTESISQQVLSLKVPDSVREKIPTQVTTVHRLLGSRPGTRHFRHH
VGNPLPLDVLVVDEASMIDLEMMANLLDALPPHARLVLLGDKDQLASVEAGAVLGDLCRD
AEAGWYSPATRQWLQAVSAEDLGNSGLQEDLDGSHPLAQQVVMLRYSRRFGEGSGIGQLA
RWVNQQNAEQARMLLAARSHDDLFCLSLKGEHDQALERLVLDGQGEGAQGYRFYLNLLQS
ARPAPQTPRDDHAWTHWAQQLLQAFDAFQLLCAVRKGPWGVEGLNLRITAALRKVRLIEG
DEQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPESDGGPQVLRVAFPRNDGQGGVRFVLP
SRLNDVETVYAMTVHKSQGSEFTHTALILPDALNPVLTKELIYTGITRAKRWFSLIEPRA
GVFEEAVRRRVKRLSGLMLELDATPEEAD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtcgccgctgctgctggaggaactgtcgccgctcagtcgcgccgccgacctg
gtgcaactgctggagcgctgggtcgaccgtggctggttgcgggccctggacagagccttc
gtcggcttcctgcacgagcttgatccacaggccgatcccctggtgctgctggcggcggca
ttgaccagtcaccaattgggtcacggccacgtatgcctcgacctgttcgaaaccctgcag
gcgccggactttgccctgtcgctgccgcccgaaggcgacctgcagaccggcgcgatgctg
ctgccgtcgcaattgctcgaggggctggacggcgcccactggtgtcatgtcctggccacc
agccgtttggtcgcgccggcgttcgatgacagtgagtcggcgcggagccgcccgttggtg
ctgtccggaacacgcctctatctgcgccgctactgggcttatgaacggcgcatcgacagt
gccttgcgcctgcggctggccagccacgaaagcgtcgccgccgatttgccgcaacgcctg
aacggtttgttcgatcaaccggcgcccgatggcgtgatcgactggcaaaaactcgcctgt
gccctggccacccggggcgcattcagtatcgtcaccggcggccccggcaccggcaagacc
accaccgtggtgcgcctgctcgcgctgttgcaggcgcctgccgtggaaagcggcaatccc
ctgcgcatccgcctggccgcgcccaccggtaaagccgccgcgcgtcttaccgaatccatc
agccagcaagtgctgtcgctgaaagtgcccgacagcgtgcgcgaaaaaatcccgacccag
gtcaccacggttcaccggttgctgggcagccgcccgggcactcggcacttccgtcatcac
gtcggcaacccgttaccgctggatgtgctggtggtggacgaagcgtcgatgatcgatctg
gaaatgatggccaacctgctcgacgctttgccgccccatgctcgcctggtgctgctgggt
gacaaggaccagcttgcgtcggtggaggcgggcgcggtgcttggtgacctgtgtcgcgat
gccgaggccggctggtacagcccggccacgcgccaatggctgcaggcggtcagcgccgaa
gacctcggcaacagcggcttgcaggaagacctcgacggcagtcatccgctggcccagcag
gtggtgatgctgcgctactcgcgtcgcttcggcgagggcagcggcatcggccagctggcg
cgctgggtcaaccagcagaacgctgagcaagcgcgcatgttgctggccgcacgcagtcat
gacgacctgttctgtctcagcctcaagggcgagcatgatcaggcgcttgagcgcctggtg
ctggacgggcagggcgaaggtgcccagggctatcgcttctacctgaacctgctgcaatcg
gcgcgtcctgcgccgcagaccccgcgtgacgatcacgcctggacccactgggcgcaacaa
ctgctgcaagccttcgacgcgttccagttgctctgcgccgtacgcaaaggtccctggggc
gtcgaagggctgaacctgcgcatcaccgccgccctgcgcaaggtgcggctgatcgagggc
gacgagcagtggtatgaagggcgtccggtgctgatgacccgtaacgactacggcctgggc
ctgatgaacggtgatatcggtatcgccttgaaattgcccgaaagcgacggtggccctcag
gtgttgcgcgtggccttcccgcgcaatgacggccagggcggtgtgcgtttcgtactgccc
agccggctcaacgacgtggaaaccgtctatgccatgaccgtgcacaaatcccagggctcg
gagttcacccacaccgcgctgattctgccggacgcgttgaacccggtgctgaccaaagaa
ctgatctacaccggtatcacccgcgccaaacgctggttcagcctgatcgaaccccgtgcc
ggcgtctttgaggaagccgtacggcgccgggtcaaacgcttgagcgggctgatgctggag
ctggacgccacgcccgaagaagctgactga
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