Pseudomonas orientalis: BOP93_21965
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Entry
BOP93_21965 CDS
T05323
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
poi
Pseudomonas orientalis
Pathway
poi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BOP93_21965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poi03400
]
BOP93_21965
Enzymes [BR:
poi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BOP93_21965
DNA repair and recombination proteins [BR:
poi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BOP93_21965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AUZ48150
UniProt:
A0A2L0S1J4
LinkDB
All DBs
Position
complement(5027799..5031251)
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AA seq
1150 aa
AA seq
DB search
MPGATSLSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPQEDDMGGCGIAAAIDVQLPGSFMWQLYRMVLGRDEIPPKSLLDKAPLTWRLMRLLPEL
IDQPHFEPLQRFLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGE
SKPLNPANCWQAELWRALLLDVGAQGMAESRAGVHQRFIERINTLEQAPPGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARKAGMPVTI
DPHTLHQHAHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDLFSESQPTTLLNQL
QDDILELRPLDETREFWPAVDLTRDASIRFHIAHSAQREVEILHDQLLQRFSADPTLRPR
DIIVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRERFAINERDLPTLHRWIEGAGIRWGLNAEQRAGLGLPAELEQNS
WRFGLRRMLLGYAVGTGVACEGIEPYDEIGGLDAALIGPLVSLLDALNDAHQALSQPAPP
HVWGERLQRLMQLFFLPGSEHDDYLLGQLEQLRETWLETCESVGLQDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSDRPASVLIGQLRDHLASGWHNAQ
SAEPLIDAMTQEHPLQPFSARYFHEGDPLFSYAREWQLLHEAPTALVHDHALAPHHQEEP
LSLGQLQDFLRNPVRHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYTLSDSLLNAALAR
PDQLDQALNAQALRLQGSGLLPMVGFGECLRNELIEPLPDLLQRYQHLLALWPTPHIGAQ
PISFAYQGIQLEGWISGLHRRGDGGLLSVTTIPNSIGSIKTRKWHRLIRPWVNHVVACAC
GVPLSTGLVASDDTLLLAPLDTATAQSLLGDLLLAWHTGMSKPLPVAVKTAFAWLGQTDP
AKAHAAASKAYEGDGITTDGERRETPALTRQFPNYATLVASEEFEGWCETLYRPLLNAPW
RSLSSEEAGA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccgggtgcgacgtccctcagcgcaggattcatggtggttcacggtaaccgcctggac
gagttgcgcagcctggtagtcagctggatgcgtcgttatcccctggcgcccttggaaaat
gaaatcgctctggtccaaagcaatggcatcgctcaatggctcaagcttgccctggccgaa
gatccgcaggaagacgacatggggggctgtggcattgccgcggcaatcgatgtgcaattg
cccggcagtttcatgtggcagctctatcgcatggtgctgggtcgtgacgaaatccccccc
aagtctctgctggataaggccccgctgacatggcgactcatgcgtctgctcccggagctt
atcgatcagccccatttcgagccgttgcaacgcttcctgacccacgacaccgacctgcgc
aaacgctaccagcttgccgagcggctggccgacttgttcgaccaataccaagtgtatcgc
gccgattggctggaagactgggcggcggggcgccatcaattacgcaacggccgtggcgaa
tccaaacccctcaaccccgccaactgttggcaggctgaattatggcgcgcgttgctgctc
gacgtcggggcgcagggcatggccgagagccgtgccggcgttcatcagcggtttatcgaa
cgcatcaacacactcgagcaagcgccgcccggcttgccttcccgcgtgattgttttcggc
atttcatcgctgcccgcccaggcgctcgaagcactggcgggcctggctcgtttcagccaa
gtgttgctgtgcgtgcacaacccttgccgccatcattggtcggacatcgtggccgacaaa
gacctgctgcgtaacgaatacaagcgccaggcgcgcaaagcgggcatgcccgtcaccatt
gatcctcacaccttgcaccagcacgctcacccgctgctcgccgcctggggcaagcagggg
cgtgactacatcagcttgttggacagttatgacgaccccaacagctaccgcgccgccttc
cgtgatggtcgtatcgacctgttcagcgagagccaacccaccacgctgctcaaccagctt
caggacgacatcctggagttgcgcccactcgatgaaacccgagagttctggccggcggtc
gatctgacacgcgacgcatccattcgctttcacatcgcccacagcgcccaacgcgaagta
gagattctccacgaccaattactccaacgtttcagcgccgaccccacgttgcgccctcgg
gacatcatcgtcatggtccccgacgtcgacagctacgcaccgcacattcgcgcggtgttc
ggtcaactggaaagaaatgacccacgcttcattccgttcaccctgacagaccaggggcaa
cgtggtcgtgacccgctgttgatcgcggtcgagcacttgctcaaactccccgacagccgt
ttcccggtcagcgaaattctcgacctgttggatgtcccggccctgcgcgaacgtttcgcc
atcaatgagcgcgacctgcctacgctgcatcgctggattgaaggcgcgggcatccgctgg
ggtctcaacgccgaacagcgtgcgggcctggggctacccgcagagctggagcagaacagc
tggcgattcggcctgcggcggatgctgcttggctacgccgtcggcacgggtgtggcgtgc
gaaggcatcgagccctacgacgagatcggtgggcttgatgcggcgctgattggtccactg
gtctccttgctcgatgccttgaatgacgcgcatcaggcgctgtcgcaacccgcacctccc
cacgtgtggggcgagcgtctgcaacgcttgatgcaactgtttttcctgcccggcagcgag
cacgatgactacctgcttggccagcttgaacagttaagagagacgtggctggaaacctgt
gaatccgtcggcctgcaggatgaattaccgctcaccgtggtccgtgaggcctggttggcc
gggcttgaccagggccgcctgtcccagcgcttcctggcgggcgcggtcaatttttgcacc
ttgatgcccatgcgcgcgatcccgttcaaactggtctgcctgctcggcatgaatgacggc
gactacccgcgtgcccagccgccactggactttgacctgatgggcagcgactaccgtccc
ggtgatcgttcacgccgtgaagacgatcgctacctgctgctcgaagccctgctgtccgcg
cgcgaccagctctatatcagttgggtcggccgcagcatccgcgacaacagcgatcgcccg
gcctcggtgctgatcggccaactgcgtgaccacctcgccagtggctggcataacgcccaa
agcgccgaacccctcatcgacgcaatgacccaggaacacccgctccaaccgttcagcgcc
cgctacttccatgaaggcgacccgctgttcagttacgctcgcgaatggcagttgctgcat
gaggccccgaccgcactggtgcacgaccacgcgctggcaccgcaccatcaggaagagccc
ctgagcctcggccagttacaggatttcctgcgcaatcctgtcaggcatttcttcagccaa
cgcctgaaagtgttcttcgaagccgccgaagtaccgttggccgacgaagaacccttcgtg
ctcgacgcactgcaacgctacaccctcagcgacagtctgctcaacgcagcactggcccgg
cccgaccagcttgatcaggccctcaacgcccaagccttgcgcctgcagggcagtggtttg
ctgccgatggtcggcttcggtgaatgcctgcgcaacgagctgatcgagccattgccggac
ctgttgcagcgctatcagcacctcctggcgctctggccaacgccgcacattggtgcgcaa
ccgatcagcttcgcgtaccagggcattcagctcgaaggctggatcagcggcctgcatcgg
cgcggtgatggcggtttgttaagcgtgaccaccatccccaacagcatcggctcgatcaag
acgcgcaagtggcaccgcctgattcgcccctgggtcaatcatgtggtcgcctgtgcctgt
ggcgtgccgttgagcaccggcctggtggccagtgacgacaccttgctgctggccccgttg
gacactgccaccgctcagagcctcctcggtgacttgctgctcgcgtggcacaccggcatg
agcaaaccgctgcccgtcgcggtaaagaccgcctttgcctggctcggccagaccgatccg
gccaaagctcacgccgctgccagcaaagcctacgagggcgacggtatcaccaccgatggc
gaacgccgcgaaacgcctgcgctcactcgccagttccccaactacgccacgctggtcgcc
agcgaagagttcgaaggctggtgcgaaaccttgtatcgccccctgctcaacgccccctgg
cgttcattgtccagcgaggaggccggcgcatga
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