Pseudomonas orientalis: BOP93_23950
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Entry
BOP93_23950 CDS
T05323
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
poi
Pseudomonas orientalis
Pathway
poi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BOP93_23950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poi03021
]
BOP93_23950
Transcription machinery [BR:
poi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BOP93_23950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
HTH_24
Peripla_BP_3
HTH_31
HTH_29
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AUZ48515
UniProt:
A0A0R2ZXH2
LinkDB
All DBs
Position
5459677..5460195
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AA seq
172 aa
AA seq
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MSSAQTPHSELVGALYRDHRGWLLAWLRRNVACPSRAEDLSQDTFMRLLGRDGLREPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPESEHPSPEAQQLILEDLKAIDRLLGKL
SSKARAAFLYNRLDGLGHADIAQRLGVSVPRVRQYLAQGIRQCYIALYGEPS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtcggcccagaccccacacagtgagcttgttggcgcgttgtatcgcgaccatcgt
ggctggctgttggcctggctgcggcgcaacgtggcctgcccgagccgcgccgaagacctg
agccaggacaccttcatgcgcctgctcggccgtgacggcctgcgcgaaccccgcgagccg
cgcgccttcctggtagcgattgccaagggtctgctgttcgactacttccgccgcgccgcc
ctggaacaggcttacctcaccgaactgatgctgatcccggaaagcgaacacccatcgccc
gaagcacagcaactgatcctcgaagacctcaaggccatcgaccgcctgctcggcaaactg
tcgagcaaagcccgcgccgccttcctctataaccgcctcgacggcctgggccatgcagac
atcgcccagcgcctgggtgtgtcggtaccgcgcgtgcgccagtacctggcccagggcatt
cgccagtgctacatcgcgttgtatggcgagccatcatga
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