KEGG   Pseudomonas orientalis: BOP93_23950
Entry
BOP93_23950       CDS       T05323                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
poi  Pseudomonas orientalis
Pathway
poi02020  Two-component system
Brite
KEGG Orthology (KO) [BR:poi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BOP93_23950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:poi03021]
    BOP93_23950
Transcription machinery [BR:poi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BOP93_23950
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Rv2175c_wHTH HTH_24 Peripla_BP_3 HTH_31 HTH_29 HTH_17
Other DBs
NCBI-ProteinID: AUZ48515
UniProt: A0A0R2ZXH2
LinkDB
Position
5459677..5460195
AA seq 172 aa
MSSAQTPHSELVGALYRDHRGWLLAWLRRNVACPSRAEDLSQDTFMRLLGRDGLREPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPESEHPSPEAQQLILEDLKAIDRLLGKL
SSKARAAFLYNRLDGLGHADIAQRLGVSVPRVRQYLAQGIRQCYIALYGEPS
NT seq 519 nt   +upstreamnt  +downstreamnt
ttgtcgtcggcccagaccccacacagtgagcttgttggcgcgttgtatcgcgaccatcgt
ggctggctgttggcctggctgcggcgcaacgtggcctgcccgagccgcgccgaagacctg
agccaggacaccttcatgcgcctgctcggccgtgacggcctgcgcgaaccccgcgagccg
cgcgccttcctggtagcgattgccaagggtctgctgttcgactacttccgccgcgccgcc
ctggaacaggcttacctcaccgaactgatgctgatcccggaaagcgaacacccatcgccc
gaagcacagcaactgatcctcgaagacctcaaggccatcgaccgcctgctcggcaaactg
tcgagcaaagcccgcgccgccttcctctataaccgcctcgacggcctgggccatgcagac
atcgcccagcgcctgggtgtgtcggtaccgcgcgtgcgccagtacctggcccagggcatt
cgccagtgctacatcgcgttgtatggcgagccatcatga

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