Pseudomonas orientalis: BOP93_24700
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Entry
BOP93_24700 CDS
T05323
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
poi
Pseudomonas orientalis
Pathway
poi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BOP93_24700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poi03400
]
BOP93_24700
Enzymes [BR:
poi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BOP93_24700
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BOP93_24700
DNA repair and recombination proteins [BR:
poi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BOP93_24700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
AUZ48662
UniProt:
A0A2L0S2Z6
LinkDB
All DBs
Position
complement(5620537..5621349)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHLEGQRVSRVVVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL
LINAEVGTLISHLGMSGNLRLVEVGMPAAKHEHVDIELESGLALRYTDPRRFGAMLWSQD
PHNHELLIRLGPEPLTALFDGERLFQQSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRRTAGGISRARYLRLAIEIKRVLAAAIERGGTTLRDFIGGDGQPGYFQQELFVYGR
GGEACKVCGSELRNVLLGQRASVFCPKCQS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttaccagaagtcgaaaccacccggcgcgggattgcccctcacctggagggc
cagcgcgtcagccgagtggtggtgcgtgagcgtcgcctgcgctggccgatccccgaagac
cttgatgtgcgcctgtccgggcagcgcatcgtgctggtggagcggcgcgccaagtacctg
ttgatcaacgccgaagtgggcaccttgatcagccacctgggcatgtcgggcaacctgcgc
ctggtggaggtgggcatgcctgcggccaagcatgaacatgtggacatcgagctggaatcc
ggcttggccctgcgctacaccgacccccggcgttttggcgcaatgctctggagccaggac
ccgcacaaccacgagctgctgatccgcctggggcccgagccgttgaccgcgctgtttgat
ggcgaacgcttgttccagcagtcccgtggacggtcgatggcggtgaagccgttcatcatg
gataacgccgtggtggtgggcgtgggcaatatctatgcgaccgaagcgctgtttgcggcg
gggatcgatccgcgtcgtacggcgggcggtatatcgcgggcgcgctacctgaggctggcg
atcgaaatcaagcgcgtgctggctgcagcgatcgagcggggcggtaccaccctgcgcgat
tttatcggcggcgacgggcagccggggtatttccagcaggaactgttcgtgtatggccgg
ggcggcgaggcgtgcaaggtctgcgggagcgagttgcgcaatgtgctgctggggcagcgg
gcgagtgtgttttgtcccaagtgtcagagctga
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