KEGG   Pseudomonas orientalis: BOP93_26330
Entry
BOP93_26330       CDS       T05323                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
poi  Pseudomonas orientalis
Pathway
poi02020  Two-component system
Brite
KEGG Orthology (KO) [BR:poi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BOP93_26330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:poi03021]
    BOP93_26330
Transcription machinery [BR:poi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BOP93_26330
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE HTH_23 HTH_20 HTH_40 HTH_11 HTH_24 TnsD RWP-RK Phage_antitermQ HTH_7 Trp_repressor
Other DBs
NCBI-ProteinID: AUZ48970
UniProt: A0A2L0S3T9
LinkDB
Position
5977780..5978286
AA seq 168 aa
MSPPSHTAAVQRIYEQHHSWLHGWLKGKLNNACDAADVAHDTFVRILGGRDAVQILEPRD
YLATIARGLVIDRYRRHAIEQAYKQTLAERPEATAISEEDKAIIIETLVAVDKALCSLGE
RARRIFMLSQIEGLTYQQIADQLRVSLTTVKKHMVRALTECSLIMASL
NT seq 507 nt   +upstreamnt  +downstreamnt
atgtcccctccttcacacacggcagctgtgcagcgcatctatgagcaacaccattcgtgg
ttgcatggttggctcaagggcaaattgaataacgcctgcgatgcagccgacgtggcccac
gatacgttcgtgcgtatcctgggtggacgcgacgccgttcaaatccttgagccacgggat
tacctggcgaccattgcaaggggcctggtgattgatcgctatcgccggcacgccattgag
caggcttataagcaaaccctggccgagcgtcctgaagccaccgccatcagtgaagaagac
aaggcaatcattatcgaaaccctggtggctgtggataaggcactgtgcagcttgggcgaa
cgtgctcgacggatcttcatgctgtcgcagatcgaggggctgacttatcaacagatcgcc
gatcaactgcgggtgtcattgaccactgtgaagaagcacatggtccgtgccctgaccgaa
tgttcactgatcatggccagcctctga

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