Pseudomonas orientalis: BOP93_26330
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Entry
BOP93_26330 CDS
T05323
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
poi
Pseudomonas orientalis
Pathway
poi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BOP93_26330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poi03021
]
BOP93_26330
Transcription machinery [BR:
poi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BOP93_26330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
HTH_20
HTH_40
HTH_11
HTH_24
TnsD
RWP-RK
Phage_antitermQ
HTH_7
Trp_repressor
Motif
Other DBs
NCBI-ProteinID:
AUZ48970
UniProt:
A0A2L0S3T9
LinkDB
All DBs
Position
5977780..5978286
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AA seq
168 aa
AA seq
DB search
MSPPSHTAAVQRIYEQHHSWLHGWLKGKLNNACDAADVAHDTFVRILGGRDAVQILEPRD
YLATIARGLVIDRYRRHAIEQAYKQTLAERPEATAISEEDKAIIIETLVAVDKALCSLGE
RARRIFMLSQIEGLTYQQIADQLRVSLTTVKKHMVRALTECSLIMASL
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctccttcacacacggcagctgtgcagcgcatctatgagcaacaccattcgtgg
ttgcatggttggctcaagggcaaattgaataacgcctgcgatgcagccgacgtggcccac
gatacgttcgtgcgtatcctgggtggacgcgacgccgttcaaatccttgagccacgggat
tacctggcgaccattgcaaggggcctggtgattgatcgctatcgccggcacgccattgag
caggcttataagcaaaccctggccgagcgtcctgaagccaccgccatcagtgaagaagac
aaggcaatcattatcgaaaccctggtggctgtggataaggcactgtgcagcttgggcgaa
cgtgctcgacggatcttcatgctgtcgcagatcgaggggctgacttatcaacagatcgcc
gatcaactgcgggtgtcattgaccactgtgaagaagcacatggtccgtgccctgaccgaa
tgttcactgatcatggccagcctctga
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integrated database retrieval system