Metapseudomonas otitidis: PtoMrB4_00980
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Entry
PtoMrB4_00980 CDS
T06890
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
poj
Metapseudomonas otitidis
Pathway
poj03030
DNA replication
poj03410
Base excision repair
poj03420
Nucleotide excision repair
poj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PtoMrB4_00980 (polA)
03410 Base excision repair
PtoMrB4_00980 (polA)
03420 Nucleotide excision repair
PtoMrB4_00980 (polA)
03440 Homologous recombination
PtoMrB4_00980 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poj03032
]
PtoMrB4_00980 (polA)
03400 DNA repair and recombination proteins [BR:
poj03400
]
PtoMrB4_00980 (polA)
Enzymes [BR:
poj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PtoMrB4_00980 (polA)
DNA replication proteins [BR:
poj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PtoMrB4_00980 (polA)
DNA repair and recombination proteins [BR:
poj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PtoMrB4_00980 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PtoMrB4_00980 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BCA26121
UniProt:
A0A1I0U2F4
LinkDB
All DBs
Position
94187..96937
Genome browser
AA seq
916 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLMTSAGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDAMFAEYKANRPSMPDELRVQVEPLHATVRALGLPLLCVEGVEADDVIGTLAR
QSAAGGRQVVISTGDKDMAQLVDPHITLVNTMTGSTLDIDGVKEKFGVGPELIIDYLALM
GDKVDNIPGVPGVGEKTALGLLTGVGGGLDVLYASLDKVPELPIRGAKGLPAKLLEHKDM
AYLSYQLATIKCDVELNVEIDALHPGEPDREALAELYRTLEFKSWLDDLQRQAKSDGEQL
ALLDAPAEPAVETRYETVLEQAQFDAWLKKLEAAPLIAFDTETTSLDAQQAQVVGVSFAV
EAGEAAYVPLAHSYMGVPAQLDRDAVLQALKPLLEDPAKAKVGQHAKYDMNVLANASTPI
TVQGIAFDTMLESYVLDSTATRHDMDSLALKYLGHSTIRFEDIAGKGAKQLTFDQIALEQ
AGPYAAEDADVTLRLHQALWQKLEAVPSLVTVLKDIEMPLVPVLARIERNGALVDGKLLG
QQSLELGEKMVALERQAYELAGQEFNLGSPKQLGAILYEKLGLPVLAKTATGQPSTAENV
LADLAEQDFELPKVIMQYRSLSKLKSTYTDKLPEQINPRTGRIHTSYHQAVAATGRLSSS
DPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLDAFRHDRD
VHRATAAEVFGVELDQVSNDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAYIDRYF
ARYPGVLAYMERTREQAAAQGFVETLFGRRLYLPEIHSKNQAMRKGAERTAINAPMQGTA
ADIMKRAMVAVDAWLQESGLDARVILQVHDELVLEVREDLVDTVRDAIRPLMSDAAELDV
PLVVEVGVGDNWDEAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccctctcgtcctcgtcgacggttcctcctacctgtaccgcgccttccat
gccctgccgccgctgatgacttcggcgggcctgcccaccggtgcggtcaagggtgtgctg
aacatgctcaagagcctgcgcaagcagtacccggacagcccgttcgcggtggtcttcgac
gccaagggcgggaccttccgcgatgcgatgttcgccgagtacaaggccaaccggccgtcc
atgccggacgagctgcgggtgcaggtggagccgctgcacgcaacggtgcgggccctgggc
ctgccgctgttgtgcgtcgagggcgtggaggccgatgacgtgatcggcaccctggcccgg
caaagcgcggcgggcgggcgccaggtggtgatctccaccggcgacaaggacatggcgcag
ttggtcgatccgcacattacgctggtcaacaccatgaccggtagcacgctggacatcgat
ggcgtgaaagagaaattcggcgtcggtcctgagctgatcatcgattacctggccctgatg
ggcgacaaggtcgacaacatccccggcgtgcccggcgtgggcgaaaagaccgccctgggc
ctgctcaccggcgtgggcggcgggctcgatgtgctctacgccagcctggacaaggtgccc
gagctgccgatccgcggcgccaaggggctgccggccaagctgctggagcacaaggacatg
gcctacctttcctaccagctcgctaccatcaagtgcgacgtggagctgaacgtcgagatc
gatgccctgcaccccggcgagccggaccgcgaggccctggccgagctgtaccgcaccctg
gagttcaagagctggctggatgacctgcagcgccaggccaagtcggacggcgaacaactg
gccctgctggatgcccctgcggagccggccgtcgagacgcgctatgaaaccgtgctggag
caggcccagttcgacgcctggctgaagaagctggaggcggcgccgctgatcgccttcgac
accgagaccaccagcctcgacgcccagcaggcgcaggtggtgggggtgtccttcgccgtg
gaagccggcgaggccgcctacgtgcccctggcccacagctacatgggcgtacccgcgcag
ctggaccgcgacgcggtgctgcaggccctgaagccgctgctggaagacccggccaaggcc
aaggtcggccagcacgccaagtacgacatgaacgtcctggccaacgcctcgacccctatc
actgtccagggcatcgccttcgacaccatgctcgagtcctatgtgctggactccacggcc
acccgccacgacatggacagcctggccctgaagtacctgggccacagcaccatccgcttc
gaggacatcgccggcaagggcgccaagcagctgaccttcgaccagatcgccctggagcag
gccggcccctacgccgccgaggacgccgacgtgaccctgcgcctgcaccaggcactgtgg
cagaagctggaggctgtcccgtccctggtcacggtgctgaaggacatcgagatgccgctg
gtgccggtgctggcgcgcatcgaacgcaacggtgcgctggtggacggcaagctgctgggc
cagcagagcctggaactgggcgagaagatggtggccctggagcgccaggcctacgagctg
gccgggcaggagttcaacctgggctcgcccaagcagctcggcgccatcctctacgagaag
ctcggcctgccggtgctggccaagaccgccaccggccagccgtccaccgccgagaacgtg
ctggcggacctggccgagcaggacttcgagctgcccaaggtgatcatgcagtaccgctcc
ctgagcaagctcaagagcacctacaccgacaagctgccggagcagatcaacccgcgcacc
gggcgcatccacacctcctaccaccaggcggtggcggccaccgggcgcctgtcctccagt
gatccgaacctgcagaacatcccgatccgcactgccgaagggcggcgcatccgtcaggcc
ttcgtcgcacccaagggctacaagctgctggcggcggactattcgcagatcgagctgcgc
atcatggcccacctggccaaggacgaaggcctgctggatgccttccgtcacgaccgcgac
gtgcaccgggcgacggcggcggaggtcttcggcgtcgagctggaccaggtcagcaatgac
cagcgccgcagcgccaaggccatcaacttcggcctcatctacggcatgagcgccttcggc
ctggccaagcagatcggcgtcgaccgcaagcagtcccaggcgtacatcgaccgctacttc
gcccgctaccccggcgtgcttgcctacatggagcgcacccgcgagcaggcggctgcccag
ggcttcgtcgagacgctgttcgggcgccggctgtacctgccggaaatccactcgaagaac
caggccatgcgcaagggcgccgagcgcaccgcgatcaacgcgccgatgcagggcactgcg
gcggacatcatgaagcgcgccatggtggcggtggatgcctggctgcaggagagcggcctg
gatgcgcgggtcatcctccaggtgcacgacgaactggtgctggaggtgcgcgaggacctg
gtggacaccgtgcgcgacgccatccgtccgcttatgagcgatgccgccgagctggatgtg
ccgctggtggtggaagtcggggtgggcgacaactgggacgaggcgcactga
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