Metapseudomonas otitidis: PtoMrB4_01100
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Entry
PtoMrB4_01100 CDS
T06890
Symbol
algB
Name
(GenBank) alginate biosynthesis transcriptional regulatory protein AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
poj
Metapseudomonas otitidis
Pathway
poj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PtoMrB4_01100 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
poj02022
]
PtoMrB4_01100 (algB)
Two-component system [BR:
poj02022
]
NtrC family
KinB-AlgB (alginate production)
PtoMrB4_01100 (algB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
cREC_REC
VpsR
AAA_22
AAA_2
AAA_19
AAA_16
HTH_23
nSTAND3
MCM
Xre-like-HTH
HTH_50
HTH_29
HTH_Tnp_1
IstB_IS21
Tnp_22_trimer
Motif
Other DBs
NCBI-ProteinID:
BCA26133
UniProt:
A0A1I0U543
LinkDB
All DBs
Position
complement(108237..109586)
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AA seq
449 aa
AA seq
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MASATETRGRILLVDDESAILRTFRYCLEDEGYSVATASSAAQAEAILQRQVFDLCFLDL
RLGEDNGLDVLAQMRVQAPWMRVVIVTAHSAVDTAVDAMQAGAADYLVKPCSPDQLRLSA
AKQLEVRQLTARLEALEGEVRKPGDGLDSQSPAMMAVLETARQVANTDANILILGESGTG
KGELARAIHGWSKRAKKACVTINCPSLSAELMESELFGHTRGAFTGASESTLGRVSQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDAVTRRADVRILAATNLNLDEMVREGRF
REDLLYRLNVITLHLPPLRERTEDLLGLAERFLARFVKDYARPARGFSEAAREALLNYAW
PGNVRELRNVIERASIICGQELVDVGNLGLSEAPSANNAPRIGAAMSLEDLEKAHIAAVL
ATSDTLDQAARTLGIDASTLYRKRKQYGL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggcaacggaaacccgcggacgcatcctgctggtggatgacgaatcggcgatc
ctgcgcaccttccggtactgcctggaggacgagggctacagcgtggccaccgccagcagc
gcggcgcaggcggaggcgatcctgcagcggcaggtgttcgacctgtgcttcctcgacctg
cgcctgggcgaggacaacggcctggacgtgctggcacagatgcgcgtgcaggcgccgtgg
atgcgggtggtgatcgtcaccgcgcattcggcggtggacacggcggtggacgccatgcag
gccggcgcggcggattacctggtcaagccctgcagccccgaccagctgcgcctgtcggcg
gccaagcagctggaagtgcgccagctgaccgcgcgcctggaagccctggagggcgaggtg
cgcaagcccggtgacggcctggactcccagagcccggcaatgatggcggtgctggaaacg
gcccggcaggtggccaacaccgacgccaacatcctcatcctcggcgagtcgggcaccggc
aagggcgagctggcccgcgccatccacggctggagcaagcgggcgaagaaggcctgcgtg
accatcaactgcccgtcgctgtcggcggaactgatggagagcgagctgttcggccacacc
cgtggcgccttcaccggggccagcgagagcaccctgggccgggtcagccaggccgacggc
ggcacgctgttcctcgacgagatcggcgattttcccctcacgttgcagcccaagttgttg
cgcttcatccaggacaaggaatacgagcgggtgggcgatgcggtgacccgccgcgccgat
gtgcgcatcctcgccgccaccaacctcaacctggacgagatggtccgcgaggggcgcttc
cgcgaggacctgctctaccgcctgaacgtgatcaccctgcacctgccgccgctgcgcgag
cgcaccgaggacctgctgggcctggccgagcgcttcctcgcgcgcttcgtgaaggactac
gcgcggccggcccggggcttcagcgaggcggcgcgggaggcgctgctgaactacgcctgg
ccgggcaacgtgcgcgagctgcgcaacgtcatcgagcgcgccagcatcatctgcggccag
gagctggtggacgtcggcaacctcggcctgagcgaggcgccgagcgccaacaacgccccg
cgcatcggcgccgccatgagcctggaggacctggagaaggcccacatcgcggcggtgctg
gccaccagcgacaccctggaccaggcagcccggacgctcggcatcgacgcctctacgctg
taccggaagcgcaagcagtacggcctatga
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