Metapseudomonas otitidis: PtoMrB4_01260
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Entry
PtoMrB4_01260 CDS
T06890
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
poj
Metapseudomonas otitidis
Pathway
poj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PtoMrB4_01260 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poj03400
]
PtoMrB4_01260 (recC)
Enzymes [BR:
poj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PtoMrB4_01260 (recC)
DNA repair and recombination proteins [BR:
poj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PtoMrB4_01260 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BCA26149
UniProt:
A0A679GED0
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All DBs
Position
125252..128500
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AA seq
1082 aa
AA seq
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MLNLYHANDLESLGELACALLAQPLADPLAPAKVVVPSQGMGRWLTLQLARAQGIAMQLD
VQLPARFVWDLTRQVLGELPPQSAFNPTTLTWRLYDWLCEPAHLEQAPRLAQYLEGGDER
RRLTLAARIADVFDQYLLYRDDWLAAWERGELLGLGPDEAWQALLWQALTVDGHPHRARL
LGDLLARLHDPAPLAGLPERLVVFGISSLPPHHMRVLEGLARHCEVILFALNPCREAWGD
IRDIRELAALPEPGIDDWYLDVGHPLLASLGKQGRDFFDALFTLGGQDFGIYAEDDGLDD
SSLLRAIQNDILRLRTRHADERLALRPDDRSLEVHVCHSPLREVEVLHDQLLARFAADPG
LTPDQVVVLTPNIERYAPYIEAVFAPREGVPRIPYSLADRSLRAELPLVEAFLALLELPQ
SRFAAEELLAWLELPALAARAGIDADDLPLIRDWLREAGVRWGRDARHRVRLGLPEDDAF
SWRQGLERLVLGFAAPPRLAGEAPPLLGDSWPLDALEGARAQLLGRLAGFIQRLGVLADD
LARPRPLADWAETLQGLIDQLFDEREAGETLLLLSQACGELRKQGEAALITRPVELALVR
QQLVAALDAGGGASGFLTGAVTFCTMVPMRSLPFRLVCLLGLDDGAFPRRTPAAGFDLIT
RRPRRGDRARRLDDRYLLLETLQSARDGLYISYVGRDPRDNASLPPSVLVSELLETVDLT
AHADGAPASQRVLVNHPLQPFAPGNFAGGVHRGYAAPWFRAAQRLAGEPQPAAAPFAEPL
PAPDADWLTLEPSMLVQCFRHPARFLLEQRLGLHLAEPEEALASDEPFALEGPAWRGLRQ
LALDAVERGWSEADERRIARAAGWLPSGELGHALWGQLRGPVRAFAPRLFEARPESAPQP
LLVDLELAGVRIHGWLDGVTEDGLFGWRLNRLGEWELAPFWLRHLLLNIAAPPGIARESR
LLSPAGDWQAGPLANARQLLEPWLVAYREALCTPLPLITKASHGFAHGLRKPGRKEPLEA
ARSKARLAWEGLDFGPRGESQDPWYALAFRDRDPLDARFETLAETLLGPALDALADDGEE
DA
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacctctaccacgccaacgacctggaaagcctcggcgagctggcctgcgccctg
ctcgcccagccgctggcggacccgctggccccggccaaggtggtggtaccgagccagggc
atgggccgctggctgaccctgcaactggcccgcgcccagggcatcgccatgcagctcgac
gtgcagctgccggcgcgcttcgtctgggacctcacccgccaggtgctgggcgaactgccg
ccgcagtcggccttcaaccccaccaccctgacctggcgcctctacgactggctctgcgag
cccgcgcacctggagcaggcaccacgcttggcgcagtacctggagggcggggacgagcgc
cgtcgcctgaccctggccgcacgcatcgccgacgtcttcgaccagtacctgctctatcgc
gacgactggctggccgcctgggagcgcggcgagctgctcgggctcggccccgacgaagcc
tggcaggcgctgctctggcaggccctcaccgtcgacggccatccccaccgcgcgcgcctg
ctgggcgacctgctggcgcggctgcacgacccggcgcccctggccgggctgcccgagcgc
ctggtggtgttcggcatcagcagcctgccgccgcaccacatgcgcgtgctggaagggctg
gcgcggcactgcgaggtcatcctcttcgccctcaacccctgccgcgaagcctggggcgac
atccgcgacatccgtgagctggccgccctgccggagccgggcatcgacgactggtacctg
gacgtcggccacccgctgctggccagcctgggtaagcaggggcgcgacttcttcgacgcc
ctgttcaccctcggcgggcaggacttcggcatctacgccgaggacgacggcctggacgac
agcagcctgctgcgcgccatccagaacgacatcctgcggctgcgcacccgccacgccgac
gagcgcctggcgctgcgcccggacgaccgctcgctggaggtgcacgtctgccactcgccg
ctgcgggaagtggaggtgctgcacgaccagctgctggcccgcttcgccgccgaccccggg
ctgacccccgaccaggtggtggtgctgacccccaacatcgagcgctacgccccctacatc
gaagcggtgttcgccccccgcgagggcgtgccgcgcatcccctacagcctggccgaccgc
agcctgcgcgccgagctgccgctggtggaggccttcctcgccctgctggagctgccccag
agccgcttcgccgccgaggaactgctggcctggctggagctgccggccctggcggcccgc
gccggcatcgacgccgatgacctgccgctgatccgcgactggctgcgcgaagccggcgtg
cgctggggccgtgatgcccgccaccgggtgcgcctgggcctgcccgaggacgacgccttc
agctggcgccagggcctggagcgcctggtgctgggcttcgctgcgccgccccggctggcc
ggcgaggccccgccgctgctgggggacagctggccgctggatgccctcgaaggcgcccgc
gcgcaactgctcggccgcctggccggcttcatccagcgccttggcgtgctcgccgacgac
ctggcccggccgcgcccgctggcggactgggccgagaccctgcaggggctgatcgaccag
ctgttcgacgaacgcgaggccggcgagaccctgctgctgctgtcccaggcctgcggcgag
ctgcgcaagcagggcgaggccgcgctgatcacccgcccggtggagctggccctggtgcgc
cagcaactggtggccgcgctggatgccggcggcggcgcctcgggcttcctcaccggcgcc
gtgaccttctgcaccatggtgcccatgcgcagcctgccgttccgcctggtgtgcctgctc
ggcctggacgacggcgccttcccccggcgcacccccgccgccggcttcgacctgatcacc
cgccggccgcgccggggcgaccgcgcccggcgcctggacgaccgctacctgctgctggaa
accctgcagtcggcccgcgatggcctctacatcagctacgtcggccgcgacccgcgggac
aacgcctcgctgccgccctcggtgctggtcagcgagctgctggaaaccgtcgacctcacc
gcccacgccgacggcgcccccgccagccagcgggtgctggtcaatcacccgctgcagccc
ttcgcccccggcaacttcgctggcggcgtccaccgtggctatgccgccccctggttccgc
gccgcccagcgcctggctggcgaaccgcagccggccgccgcgcccttcgccgagccgttg
ccggcgcccgacgccgactggctgaccctggaaccctcgatgctggtgcagtgcttccgc
cacccggcgcgcttcctgctggagcagcgcctcggcttgcacctggccgagcccgaggag
gccctcgccagcgacgaacccttcgccctcgaaggccccgcctggcgcggcctgcgccag
ctcgccctggacgccgtcgagcgcggctggtccgaggccgacgagcgccgcatcgcccgc
gccgccggctggctgcccagcggcgagctcggccacgccctgtggggccaactgcgcggc
ccggtgcgtgccttcgccccccggctgttcgaagcccgtccggagagcgcgccgcaaccg
ctgctggtggacctggaactggccggtgtgcgcatccacggctggctcgacggggtgacc
gaagacggcctgttcggctggcgcctgaaccgcctcggcgaatgggagctggcgcccttc
tggctgcgccacctgctgctgaacatcgccgcgccccccggtatcgcccgggagagccgc
ctgctgtcgccggccggagactggcaggccggccccctggccaacgcccggcaattgctg
gagccctggctggtggcctaccgcgaggccctctgcaccccgctgccgctgatcaccaag
gccagccacggcttcgcccacggcctgcgcaagcccggccgcaaggagcccctggaggcg
gcccgcagcaaggcccgcctggcctgggaaggcctcgacttcggcccccgtggcgaatcc
caggacccctggtacgccctcgccttccgcgaccgcgaccccctggacgcacgcttcgaa
accctcgccgagaccctgctcggcccggccctggacgccctggccgatgatggcgaggag
gacgcatga
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