Metapseudomonas otitidis: PtoMrB4_01970
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Entry
PtoMrB4_01970 CDS
T06890
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
poj
Metapseudomonas otitidis
Pathway
poj00300
Lysine biosynthesis
poj00470
D-Amino acid metabolism
poj01100
Metabolic pathways
poj01110
Biosynthesis of secondary metabolites
poj01120
Microbial metabolism in diverse environments
poj01230
Biosynthesis of amino acids
Module
poj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PtoMrB4_01970 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PtoMrB4_01970 (lysA)
Enzymes [BR:
poj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PtoMrB4_01970 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BCA26220
UniProt:
A0A1I0SHV2
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Position
complement(199923..201170)
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AA seq
415 aa
AA seq
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MDAFTYRDGELFAEGVALSAIASRFGTPTYVYSRAHIEAQYRSYADALQGVPHLVCYAVK
ANSNLAVLNLLARLGSGFDIVSSGELERVLAAGGSADRIVFSGVGKSRDDMRRALEVGVH
CFNVESVDELERLQVVAAEMDVKAPISLRVNPDVDAGTHPYISTGLKENKFGIAIEQAEA
VYLRAASLSNLDVIGVDCHIGSQLTSLPPFLDALDRLLALVDRLATQGVHIRHLDLGGGL
GVRYKDEQPPVAGDYIKAVRERIAGRDLALVFEPGRYIVANAGVLLTQVEYLKHTEHKNF
AVIDAAMNDLIRPALYQAWMDVVPVQPRDGEAQRYDLVGPICETGDFLAKDRDLALAEGD
LLAVRSAGAYGFVMSSNYNTRGRAAEVMVDGEQAYEVRRRETLEELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcacttaccgcgacggtgagctgttcgcggaaggcgtggccttgtccgcc
atcgcctcgcgcttcggcacccccacctacgtctattcccgcgcgcacatcgaggcgcag
taccgctcctatgccgatgccctgcagggcgtgccgcacctggtctgctacgcggtcaag
gccaactccaacctggcggtgctgaacctgctggcgcgcctgggctcgggcttcgacatc
gtctccagcggcgagctggagcgcgtgctggccgccggtggctcggctgaccgcatcgtc
ttctccggcgtcggcaagagccgcgacgacatgcgccgcgcactggaagtgggcgtgcac
tgcttcaacgtggaatcggtggacgagctggagcgcctgcaggtggtcgccgccgagatg
gacgtgaaagcgccgatctccctgcgggtgaaccccgacgtggacgctggcacccacccg
tacatctccaccggcctgaaggaaaacaagttcggcatcgccatcgagcaggcggaggcc
gtctacctgcgcgccgcctcgctgtcgaacctggacgtgatcggcgtggactgccacatc
ggctcccagctgaccagcctgccgcccttcctcgacgccctcgaccgcctgctggcactg
gtcgaccgcctcgccacccagggcgtgcacatccgccacctggacctcggcggtggcctc
ggcgtgcgctacaaggacgagcagccgcccgttgccggcgactacatcaaggccgtgcgc
gagcgcatcgccgggcgtgacctggcgctggtgttcgagccgggccgctacatcgtcgcc
aatgccggcgtgctgctgacccaggtggaatacctcaagcacaccgagcataagaacttc
gccgtgatcgacgcggccatgaacgacctgatccgcccggccctgtaccaggcctggatg
gacgtggtaccggtgcagccgcgcgacggcgaggcccagcgctacgacctggtcggcccg
atctgcgagaccggcgacttcctcgccaaggaccgcgacctggccctggccgagggcgac
ctgctggccgtgcgctcggccggtgcctacggcttcgtcatgagctccaactacaacacc
cgcggccgtgccgccgaggtgatggtggatggggaacaggcctacgaagtgcgtcgccgc
gaaaccctcgaggaactctacgccggcgaaagcctgcttccggagtaa
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