Pseudomonas otitidis: PtoMrB4_04840
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Entry
PtoMrB4_04840 CDS
T06890
Symbol
soxA
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
poj
Pseudomonas otitidis
Pathway
poj00260
Glycine, serine and threonine metabolism
poj01100
Metabolic pathways
Module
poj_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PtoMrB4_04840 (soxA)
Enzymes [BR:
poj01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
PtoMrB4_04840 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
PtoMrB4_04840 (soxA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
HI0933_like
NAD_binding_8
DAO
GIDA
FAD_binding_3
Pyr_redox_3
Pyr_redox
Thi4
AlaDh_PNT_C
SoxG
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
BCA26507
UniProt:
A0A679GI70
LinkDB
All DBs
Position
507755..510775
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AA seq
1006 aa
AA seq
DB search
MSQVNRLPKGGRVERGQPLTFTFNGQNYQGYAGDTLASALLANGVDVIGRSFKYSRPRGI
VAAGAEEPNAILQLGSTEQAQVPNIRATQQALYGGLVASSTNGWPSVNTDLMGILGKVGG
GMMPPGFYYKTFMYPQNLWLTYEKYIRKAAGLGRSPTEVDPDIYDHLNQHCDVLVVGAGP
AGLAAALAAGRSGARVILADEQEEFGGSLLDTRETLDGKPAAEWVAKALAELASLPEVTL
LPRATVNGYHDHNFLTIHQRLTDHLGEVAPRGQARHRVHRVRAKRVVLAAGAHERPLVYA
NNDVPGNMLAGAVSTYVNRYSVAPGRELVLSTNNDYAYRVVLDWLDAGQKVVAVADARSN
PRGAWVEEARARGVRILTGSAVVECRGSKRVTGARICAIDVKGHRVTSPGEVVDCDLIVS
SGGYSPVVHLASHLGGKPTWREDILAFVPSEGGFQKRLCAGAVNGVFGLGDVLADGYEAG
AKAAAEAGFKPVEGVVPKAAIRHEEPTLALFQVPHDKSTARAPKQFVDLQNDVTAAGIEL
ATREGFESVEHVKRYTALGFGTDQGKLGNINGLAIAARSMGISVAEMGTTMFRPNYTPVT
FGAVAGRHCGHLFDPKRYTAMHSWHLAQGAEFEDVGQWKRPWYFPKNGEDLHAAVARECK
AVRESVGILDASTLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDG
VTACVGDNHFIMTTTTGGAARVMEWLELYHQTEWPEMKVYFTSVTDHWATMTLSGPNSRK
LLAEVTDIDLDKDAFPFMSWKEGKVGGVPARVFRISFTGELSYEVNVQADYALGVWKQLI
EAGKKYNLTPYGTETMHVLRAEKGFIIVGQDTDGSVTPDDLGMGWCVGRNKPFSWIGWRG
MNREDCLREGRKQLVGLKPLDPNKVLPEGAQLVFDPKQSIPMKMVGHVTSSYMSASLGHA
FALAVVKGGLKRMGERVFAPLADGSVIEAEICSSVFYDPKGDRQNV
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggtcaaccgccttcccaaggggggccgcgtcgagcgtggccagcccctgacc
ttcaccttcaacggccagaactaccagggctacgccggcgacaccctcgcctccgccttg
ctggccaacggcgtggacgtcatcggtcgctccttcaaatactcccgcccgcgcggcatc
gtcgccgccggtgccgaagagcccaatgccatcctccagctgggctccaccgaacaggcc
caggtgccgaacatccgcgccacccagcaggccctgtacggcggcctggtggccagcagc
accaacggctggccgagcgtcaacaccgacctgatgggcatcctcggcaaggtcggcggc
ggcatgatgccgcccgggttctactacaagaccttcatgtacccgcagaacctgtggctg
acctacgagaagtacatccgcaaggccgccggcctgggccgctcgcccaccgaagtggac
ccggacatctacgaccacctcaaccagcactgcgacgtgctggtggtcggtgccggcccc
gccggcctggctgccgccctggcggccggtcgtagcggcgcccgcgtgatcctcgccgac
gagcaggaagagttcggcggcagcctgctggacacccgcgaaaccctcgacggcaagccc
gccgccgaatgggtcgccaaggccctggccgagctggccagcctgccggaggtgaccctg
ctgccgcgcgccacggtgaacggctaccacgaccacaacttcctcaccatccaccagcgc
ctcaccgaccacctgggtgaagtcgccccccgtggccaggcgcgccaccgcgtccaccgc
gtgcgcgccaagcgcgtggtgctggccgccggcgcccacgagcggccgctggtgtatgcc
aacaacgacgtccccggcaacatgctggccggtgccgtctccacctacgtcaaccgctac
agcgtggcccccggccgcgaactggtgctgtccaccaacaacgactacgcctaccgcgtg
gtgctggactggctggacgccgggcagaaagtggtcgccgtcgccgacgcccgcagcaac
ccgcgcggcgcctgggtcgaggaagcccgcgcccgtggcgtgcgcatcctcaccggcagc
gccgtggtcgagtgccgtggcagcaagcgcgtcaccggtgcccgcatctgcgccatcgac
gtcaagggccaccgcgtcaccagccccggcgaagtggtggattgcgacctgatcgtcagc
tccggcggctacagccccgtggtgcacctggcctcccacctgggcggcaagcccacctgg
cgcgaagacatcctggccttcgtgcccagcgagggcggcttccagaagcgcctgtgcgcc
ggtgccgtgaacggcgtcttcggcctcggcgacgtcctcgccgacggctacgaggccggt
gccaaggccgctgccgaagccggcttcaagccggtggaaggcgtcgtgcccaaggccgcc
atccgtcacgaggagcccaccctggcgctgttccaggtgccccacgacaagtccaccgcc
cgcgcgcccaagcagttcgtcgacctgcagaacgacgtcaccgccgccggcatcgaactg
gccacccgcgagggcttcgaatcggtcgagcacgtcaagcgctacaccgcgctgggcttc
ggcaccgaccagggcaagctgggcaacatcaacggcctggccatcgccgcccgttcgatg
ggcatcagcgttgccgagatgggcaccaccatgttccgcccgaactacaccccggtgacc
ttcggcgccgtggccgggcgtcactgcggccacctgttcgatcccaagcgctacaccgcc
atgcacagctggcacctggcccagggcgccgagttcgaggacgtcggccagtggaagcgc
ccctggtatttcccgaagaacggcgaggacctgcacgccgccgtggcccgcgaatgcaag
gccgtgcgcgagagcgtgggcatcctcgatgcctccaccctcggcaagatcgacatccag
ggcccggacgcccgtgagttcctcaaccgtgtctacaccaacgcatggaccaagctggac
gtgggcaaggcccgctacggcctgatgtgcaaggaagacggcatggtcttcgacgacggc
gtcaccgcctgcgtcggcgacaaccacttcatcatgaccaccaccaccggcggcgccgcc
cgcgtcatggagtggctggagctgtaccaccagaccgagtggccggagatgaaggtgtac
ttcacctcggtcaccgaccactgggccaccatgaccctgtccggccccaacagccgcaag
ctgctggccgaggttaccgacatcgacctggacaaggacgccttccccttcatgagctgg
aaggaaggcaaggtggggggcgtgccggcgcgggtgttccgcatctccttcaccggcgag
ctgtcctatgaagtgaacgtgcaggccgactacgccctgggcgtgtggaagcagctgatc
gaggccggcaagaagtacaacctgaccccctacggcaccgagaccatgcacgtgctgcgg
gccgagaagggcttcatcatcgtcggccaggacaccgacggctcggtcaccccggacgac
ctgggcatgggctggtgcgtcggccgcaacaagccgttctcctggatcggctggcgcggc
atgaaccgcgaggactgcctgcgcgagggccgcaagcaactggtgggcctcaagccgctg
gacccgaacaaggtcctgccggaaggcgcgcagctggtgttcgatcccaagcagtccatc
ccgatgaagatggtcggccacgtcacctccagctacatgagcgccagccttggccatgcc
ttcgccctggccgtggtcaagggcggcctcaagcgcatgggcgagcgggtcttcgccccc
ctggccgatggcagcgtgatcgaagccgaaatctgcagctccgtgttctatgacccgaaa
ggggatcgccagaatgtctaa
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