Metapseudomonas otitidis: PtoMrB4_05070
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Entry
PtoMrB4_05070 CDS
T06890
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
poj
Metapseudomonas otitidis
Pathway
poj03030
DNA replication
poj03430
Mismatch repair
poj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PtoMrB4_05070
03430 Mismatch repair
PtoMrB4_05070
03440 Homologous recombination
PtoMrB4_05070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poj03032
]
PtoMrB4_05070
03400 DNA repair and recombination proteins [BR:
poj03400
]
PtoMrB4_05070
Enzymes [BR:
poj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PtoMrB4_05070
DNA replication proteins [BR:
poj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PtoMrB4_05070
DNA repair and recombination proteins [BR:
poj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PtoMrB4_05070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BCA26530
UniProt:
A0A679GG24
LinkDB
All DBs
Position
complement(533936..534643)
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AA seq
235 aa
AA seq
DB search
MNAFSWFTRRQRPALTDDQQQRRDALPAPQALDDRPLAEQRFVVLDLETSGLDMSRDLVL
SIGAVSIEAGAIPLGRGFEATLYRNAGTSPAVLIHGIAPSVSAAGLAPAEALLDFMDYLG
DSPVLAFHAPFDQRMLARALRQDLGLRLRHPFLDIAELAPLLCPDAGIRNGGLDQWAEHF
GLQVQQRHHASADALATAEMALILFAHARRQGLDSPAALSAALARQQRRQQQPGF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccttctcctggttcacccggcgccagcgcccagccctgacagacgaccagcag
cagcgccgcgacgccctgcccgcgccccaggcgctggacgaccggcccctggccgagcag
cgcttcgtggtgctcgacctggagaccagcggcctggacatgagccgcgacctggtgctg
tccatcggcgcggtgagcatcgaggccggcgccattcccctcggacggggcttcgaagcg
accctgtaccggaacgccggcacctcccccgccgtgctcatccacggcatcgcccccagc
gtctccgccgccggcctggcgccggccgaagccctgctggacttcatggactacctgggc
gacagcccggtgctggccttccacgcccccttcgaccagcgcatgctcgcccgcgccctg
cgccaggacctgggcctgcgcctgcgccacccgttcctcgacatcgccgaactggccccc
ctgctctgccccgacgccggcatccgcaacggcgggctggaccagtgggccgagcatttc
ggcctgcaggtgcagcagcgccaccacgccagcgccgatgccctggccaccgccgagatg
gccctgatcctcttcgcccacgcccgccgccaagggctggacagccccgccgcactgtcc
gccgccctcgcccggcagcaacgccgccagcagcaacccgggttctga
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